Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2jO08740 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.18■□□□□ 0.98
Polr2jO08740 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Polr2jO08740 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.17■□□□□ 0.98
Polr2jO08740 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.17■□□□□ 0.98
Polr2jO08740 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.17■□□□□ 0.98
Polr2jO08740 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Polr2jO08740 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2jO08740 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2jO08740 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2jO08740 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2jO08740 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
Polr2jO08740 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.16■□□□□ 0.98
Polr2jO08740 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Polr2jO08740 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Polr2jO08740 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.15■□□□□ 0.98
Polr2jO08740 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.15■□□□□ 0.98
Polr2jO08740 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Polr2jO08740 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.14■□□□□ 0.98
Polr2jO08740 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Polr2jO08740 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr2jO08740 Gm4799-201ENSMUST00000095396 657 ntBASIC21.14■□□□□ 0.97
Polr2jO08740 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Polr2jO08740 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2jO08740 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Polr2jO08740 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr2jO08740 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Polr2jO08740 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Polr2jO08740 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2jO08740 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2jO08740 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2jO08740 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr2jO08740 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2jO08740 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.11■□□□□ 0.97
Polr2jO08740 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2jO08740 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Polr2jO08740 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Polr2jO08740 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.11■□□□□ 0.97
Polr2jO08740 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr2jO08740 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.1■□□□□ 0.97
Polr2jO08740 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Polr2jO08740 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.1■□□□□ 0.97
Polr2jO08740 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr2jO08740 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Polr2jO08740 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr2jO08740 Gm8503-201ENSMUST00000118131 455 ntBASIC21.09■□□□□ 0.97
Polr2jO08740 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr2jO08740 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.09■□□□□ 0.97
Polr2jO08740 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Polr2jO08740 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Polr2jO08740 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.08■□□□□ 0.97
Polr2jO08740 Gm9812-201ENSMUST00000061934 968 ntBASIC21.08■□□□□ 0.97
Polr2jO08740 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Polr2jO08740 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Polr2jO08740 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr2jO08740 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr2jO08740 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.07■□□□□ 0.96
Polr2jO08740 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr2jO08740 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr2jO08740 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Polr2jO08740 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.06■□□□□ 0.96
Polr2jO08740 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr2jO08740 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Polr2jO08740 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.06■□□□□ 0.96
Polr2jO08740 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Polr2jO08740 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.05■□□□□ 0.96
Polr2jO08740 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.05■□□□□ 0.96
Polr2jO08740 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Polr2jO08740 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr2jO08740 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.04■□□□□ 0.96
Polr2jO08740 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Polr2jO08740 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.04■□□□□ 0.96
Polr2jO08740 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Polr2jO08740 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr2jO08740 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Polr2jO08740 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.03■□□□□ 0.96
Polr2jO08740 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr2jO08740 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.03■□□□□ 0.96
Polr2jO08740 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Polr2jO08740 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Polr2jO08740 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Polr2jO08740 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Polr2jO08740 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms