Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm10542F6XDR3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm10542F6XDR3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm10542F6XDR3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10542F6XDR3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm10542F6XDR3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10542F6XDR3 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.27■□□□□ 0.04
Gm10542F6XDR3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm10542F6XDR3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10542F6XDR3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Gm10542F6XDR3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm10542F6XDR3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm10542F6XDR3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10542F6XDR3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10542F6XDR3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10542F6XDR3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10542F6XDR3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm10542F6XDR3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10542F6XDR3 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.25■□□□□ 0.03
Gm10542F6XDR3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10542F6XDR3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm10542F6XDR3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10542F6XDR3 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.23■□□□□ 0.03
Gm10542F6XDR3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10542F6XDR3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm10542F6XDR3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10542F6XDR3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10542F6XDR3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm10542F6XDR3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm10542F6XDR3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10542F6XDR3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10542F6XDR3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10542F6XDR3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm10542F6XDR3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms