Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NACAE9PAV3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
NACAE9PAV3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NACAE9PAV3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.58■□□□□ 0.4
NACAE9PAV3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NACAE9PAV3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.57■□□□□ 0.4
NACAE9PAV3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.57■□□□□ 0.4
NACAE9PAV3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.57■□□□□ 0.4
NACAE9PAV3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NACAE9PAV3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NACAE9PAV3 AC020928.2-201ENST00000588717 2197 ntBASIC17.56■□□□□ 0.4
NACAE9PAV3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 GPX1-201ENST00000419349 1106 ntBASIC17.56■□□□□ 0.4
NACAE9PAV3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.56■□□□□ 0.4
NACAE9PAV3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 MIR219A2-201ENST00000608502 1504 ntBASIC17.56■□□□□ 0.4
NACAE9PAV3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NACAE9PAV3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.56■□□□□ 0.4
NACAE9PAV3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NACAE9PAV3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.56■□□□□ 0.4
NACAE9PAV3 AC135731.1-201ENST00000569415 2548 ntBASIC17.56■□□□□ 0.4
NACAE9PAV3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.56■□□□□ 0.4
NACAE9PAV3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NACAE9PAV3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NACAE9PAV3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NACAE9PAV3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.55■□□□□ 0.4
NACAE9PAV3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NACAE9PAV3 RARRES2P2-201ENST00000394842 485 ntBASIC17.55■□□□□ 0.4
NACAE9PAV3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NACAE9PAV3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NACAE9PAV3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NACAE9PAV3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NACAE9PAV3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NACAE9PAV3 ERN1-208ENST00000606895 2068 ntBASIC17.53■□□□□ 0.4
NACAE9PAV3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NACAE9PAV3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NACAE9PAV3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NACAE9PAV3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NACAE9PAV3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NACAE9PAV3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NACAE9PAV3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
NACAE9PAV3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NACAE9PAV3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NACAE9PAV3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.52■□□□□ 0.4
NACAE9PAV3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NACAE9PAV3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.52■□□□□ 0.4
NACAE9PAV3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.52■□□□□ 0.4
NACAE9PAV3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NACAE9PAV3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NACAE9PAV3 DUSP8P4-201ENST00000399538 1761 ntBASIC17.52■□□□□ 0.39
NACAE9PAV3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.52■□□□□ 0.39
NACAE9PAV3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NACAE9PAV3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NACAE9PAV3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.52■□□□□ 0.39
NACAE9PAV3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.51■□□□□ 0.39
NACAE9PAV3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NACAE9PAV3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NACAE9PAV3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.51■□□□□ 0.39
NACAE9PAV3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NACAE9PAV3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NACAE9PAV3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.5■□□□□ 0.39
NACAE9PAV3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NACAE9PAV3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.5■□□□□ 0.39
NACAE9PAV3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NACAE9PAV3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NACAE9PAV3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.5■□□□□ 0.39
NACAE9PAV3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NACAE9PAV3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.5■□□□□ 0.39
NACAE9PAV3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NACAE9PAV3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NACAE9PAV3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms