Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Shroom2A2ALU4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC36.6■■■■□ 3.45
Shroom2A2ALU4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC36.59■■■■□ 3.45
Shroom2A2ALU4 Gm16464-201ENSMUST00000117815 1095 ntBASIC36.58■■■■□ 3.45
Shroom2A2ALU4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC36.58■■■■□ 3.45
Shroom2A2ALU4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC36.58■■■■□ 3.45
Shroom2A2ALU4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC36.58■■■■□ 3.45
Shroom2A2ALU4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
Shroom2A2ALU4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC36.56■■■■□ 3.44
Shroom2A2ALU4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Shroom2A2ALU4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
Shroom2A2ALU4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC36.56■■■■□ 3.44
Shroom2A2ALU4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Shroom2A2ALU4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC36.55■■■■□ 3.44
Shroom2A2ALU4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Shroom2A2ALU4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC36.55■■■■□ 3.44
Shroom2A2ALU4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC36.55■■■■□ 3.44
Shroom2A2ALU4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC36.55■■■■□ 3.44
Shroom2A2ALU4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Shroom2A2ALU4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Shroom2A2ALU4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC36.54■■■■□ 3.44
Shroom2A2ALU4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC36.54■■■■□ 3.44
Shroom2A2ALU4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC36.53■■■■□ 3.44
Shroom2A2ALU4 AC116713.1-201ENSMUST00000215074 430 ntBASIC36.53■■■■□ 3.44
Shroom2A2ALU4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC36.53■■■■□ 3.44
Shroom2A2ALU4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Shroom2A2ALU4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC36.51■■■■□ 3.44
Shroom2A2ALU4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Shroom2A2ALU4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC36.5■■■■□ 3.43
Shroom2A2ALU4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC36.49■■■■□ 3.43
Shroom2A2ALU4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC36.49■■■■□ 3.43
Shroom2A2ALU4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC36.49■■■■□ 3.43
Shroom2A2ALU4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
Shroom2A2ALU4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Shroom2A2ALU4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC36.48■■■■□ 3.43
Shroom2A2ALU4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC36.47■■■■□ 3.43
Shroom2A2ALU4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Shroom2A2ALU4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Shroom2A2ALU4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Shroom2A2ALU4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Shroom2A2ALU4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC36.44■■■■□ 3.42
Shroom2A2ALU4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Shroom2A2ALU4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
Shroom2A2ALU4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Shroom2A2ALU4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Shroom2A2ALU4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Shroom2A2ALU4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC36.42■■■■□ 3.42
Shroom2A2ALU4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC36.42■■■■□ 3.42
Shroom2A2ALU4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Shroom2A2ALU4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC36.4■■■■□ 3.42
Shroom2A2ALU4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
Shroom2A2ALU4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC36.39■■■■□ 3.42
Shroom2A2ALU4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
Shroom2A2ALU4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC36.38■■■■□ 3.41
Shroom2A2ALU4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC36.38■■■■□ 3.41
Shroom2A2ALU4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Shroom2A2ALU4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Shroom2A2ALU4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC36.37■■■■□ 3.41
Shroom2A2ALU4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Shroom2A2ALU4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC36.37■■■■□ 3.41
Shroom2A2ALU4 Gm40881-201ENSMUST00000223397 166 ntBASIC36.37■■■■□ 3.41
Shroom2A2ALU4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Shroom2A2ALU4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
Shroom2A2ALU4 Gm2011-201ENSMUST00000203124 1263 ntBASIC36.34■■■■□ 3.41
Shroom2A2ALU4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Shroom2A2ALU4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
Shroom2A2ALU4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC36.33■■■■□ 3.41
Shroom2A2ALU4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC36.33■■■■□ 3.41
Shroom2A2ALU4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC36.33■■■■□ 3.41
Shroom2A2ALU4 Gm28731-201ENSMUST00000185564 1569 ntBASIC36.32■■■■□ 3.41
Shroom2A2ALU4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Shroom2A2ALU4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
Shroom2A2ALU4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC36.31■■■■□ 3.4
Shroom2A2ALU4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
Shroom2A2ALU4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Shroom2A2ALU4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Shroom2A2ALU4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC36.3■■■■□ 3.4
Shroom2A2ALU4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Shroom2A2ALU4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC36.3■■■■□ 3.4
Shroom2A2ALU4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC36.3■■■■□ 3.4
Shroom2A2ALU4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Shroom2A2ALU4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Shroom2A2ALU4 AC112142.1-201ENSMUST00000228796 918 ntBASIC36.29■■■■□ 3.4
Shroom2A2ALU4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Shroom2A2ALU4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC36.28■■■■□ 3.4
Shroom2A2ALU4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC36.28■■■■□ 3.4
Shroom2A2ALU4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC36.27■■■■□ 3.4
Shroom2A2ALU4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Shroom2A2ALU4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
Shroom2A2ALU4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Shroom2A2ALU4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC36.26■■■■□ 3.39
Shroom2A2ALU4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Shroom2A2ALU4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC36.25■■■■□ 3.39
Shroom2A2ALU4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Shroom2A2ALU4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Shroom2A2ALU4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Shroom2A2ALU4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Shroom2A2ALU4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC36.23■■■■□ 3.39
Shroom2A2ALU4 Golgb1-201ENSMUST00000023534 498 ntBASIC36.23■■■■□ 3.39
Shroom2A2ALU4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms