Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.76■□□□□ 0.75
Slc25a53A2AF28 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc25a53A2AF28 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc25a53A2AF28 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc25a53A2AF28 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc25a53A2AF28 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc25a53A2AF28 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc25a53A2AF28 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc25a53A2AF28 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.72■□□□□ 0.75
Slc25a53A2AF28 Gm5812-201ENSMUST00000061073 957 ntBASIC19.72■□□□□ 0.75
Slc25a53A2AF28 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc25a53A2AF28 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc25a53A2AF28 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc25a53A2AF28 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc25a53A2AF28 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc25a53A2AF28 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc25a53A2AF28 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Gm43566-201ENSMUST00000196851 808 ntBASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc25a53A2AF28 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Gm45444-201ENSMUST00000211394 898 ntBASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc25a53A2AF28 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc25a53A2AF28 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
Slc25a53A2AF28 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Slc25a53A2AF28 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc25a53A2AF28 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc25a53A2AF28 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc25a53A2AF28 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc25a53A2AF28 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc25a53A2AF28 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc25a53A2AF28 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.64■□□□□ 0.73
Slc25a53A2AF28 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc25a53A2AF28 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc25a53A2AF28 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc25a53A2AF28 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc25a53A2AF28 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc25a53A2AF28 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc25a53A2AF28 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms