Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ssc4dA1L0T3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssc4dA1L0T3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ssc4dA1L0T3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssc4dA1L0T3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.61■■□□□ 1.05
Ssc4dA1L0T3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.6■■□□□ 1.05
Ssc4dA1L0T3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.59■■□□□ 1.05
Ssc4dA1L0T3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssc4dA1L0T3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssc4dA1L0T3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ssc4dA1L0T3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssc4dA1L0T3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssc4dA1L0T3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssc4dA1L0T3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ssc4dA1L0T3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssc4dA1L0T3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.57■■□□□ 1.04
Ssc4dA1L0T3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssc4dA1L0T3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssc4dA1L0T3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
Ssc4dA1L0T3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssc4dA1L0T3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssc4dA1L0T3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssc4dA1L0T3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssc4dA1L0T3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.54■■□□□ 1.04
Ssc4dA1L0T3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.54■■□□□ 1.04
Ssc4dA1L0T3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ssc4dA1L0T3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssc4dA1L0T3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ssc4dA1L0T3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ssc4dA1L0T3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ssc4dA1L0T3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssc4dA1L0T3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssc4dA1L0T3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ssc4dA1L0T3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ssc4dA1L0T3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.49■■□□□ 1.03
Ssc4dA1L0T3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssc4dA1L0T3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Ssc4dA1L0T3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssc4dA1L0T3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.48■■□□□ 1.03
Ssc4dA1L0T3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssc4dA1L0T3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssc4dA1L0T3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssc4dA1L0T3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssc4dA1L0T3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssc4dA1L0T3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssc4dA1L0T3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ssc4dA1L0T3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ssc4dA1L0T3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
Ssc4dA1L0T3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.45■■□□□ 1.02
Ssc4dA1L0T3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ssc4dA1L0T3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssc4dA1L0T3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssc4dA1L0T3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssc4dA1L0T3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssc4dA1L0T3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ssc4dA1L0T3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssc4dA1L0T3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms