Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.55■□□□□ 0.88
IsxA1A546 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 Gm24970-201ENSMUST00000175582 82 ntBASIC20.55■□□□□ 0.88
IsxA1A546 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
IsxA1A546 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IsxA1A546 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IsxA1A546 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IsxA1A546 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
IsxA1A546 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IsxA1A546 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IsxA1A546 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
IsxA1A546 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
IsxA1A546 Gm30023-201ENSMUST00000197970 889 ntBASIC20.53■□□□□ 0.88
IsxA1A546 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
IsxA1A546 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
IsxA1A546 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IsxA1A546 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
IsxA1A546 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IsxA1A546 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.52■□□□□ 0.88
IsxA1A546 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IsxA1A546 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IsxA1A546 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
IsxA1A546 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.52■□□□□ 0.87
IsxA1A546 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
IsxA1A546 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IsxA1A546 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IsxA1A546 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.5■□□□□ 0.87
IsxA1A546 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IsxA1A546 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
IsxA1A546 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IsxA1A546 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IsxA1A546 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.5■□□□□ 0.87
IsxA1A546 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IsxA1A546 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IsxA1A546 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
IsxA1A546 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IsxA1A546 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.47■□□□□ 0.87
IsxA1A546 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.46■□□□□ 0.87
IsxA1A546 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.46■□□□□ 0.87
IsxA1A546 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
IsxA1A546 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
IsxA1A546 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IsxA1A546 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IsxA1A546 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IsxA1A546 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
IsxA1A546 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
IsxA1A546 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IsxA1A546 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
IsxA1A546 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
IsxA1A546 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IsxA1A546 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.45■□□□□ 0.86
IsxA1A546 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.45■□□□□ 0.86
IsxA1A546 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IsxA1A546 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IsxA1A546 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IsxA1A546 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IsxA1A546 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IsxA1A546 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
IsxA1A546 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
IsxA1A546 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IsxA1A546 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.43■□□□□ 0.86
IsxA1A546 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IsxA1A546 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IsxA1A546 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IsxA1A546 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IsxA1A546 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.42■□□□□ 0.86
IsxA1A546 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IsxA1A546 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
IsxA1A546 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
IsxA1A546 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IsxA1A546 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IsxA1A546 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IsxA1A546 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.41■□□□□ 0.86
IsxA1A546 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
IsxA1A546 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IsxA1A546 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IsxA1A546 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
IsxA1A546 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
IsxA1A546 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IsxA1A546 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IsxA1A546 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IsxA1A546 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
IsxA1A546 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IsxA1A546 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IsxA1A546 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IsxA1A546 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms