Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 DUX4L11-201ENST00000611504 1267 ntBASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 DUX4L12-201ENST00000614593 1267 ntBASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 DUX4L14-201ENST00000621227 1267 ntBASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 AC148477.6-201ENST00000623746 465 ntBASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00959A0A1B0GUT2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LINC00959A0A1B0GUT2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00959A0A1B0GUT2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00959A0A1B0GUT2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00959A0A1B0GUT2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.52■□□□□ 0.24
LINC00959A0A1B0GUT2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00959A0A1B0GUT2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00959A0A1B0GUT2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00959A0A1B0GUT2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.52■□□□□ 0.23
LINC00959A0A1B0GUT2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.52■□□□□ 0.23
LINC00959A0A1B0GUT2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00959A0A1B0GUT2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LINC00959A0A1B0GUT2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00959A0A1B0GUT2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00959A0A1B0GUT2 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00959A0A1B0GUT2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00959A0A1B0GUT2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 AL359258.2-201ENST00000564063 1566 ntBASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00959A0A1B0GUT2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00959A0A1B0GUT2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 HLA-V-202ENST00000446817 847 ntBASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00959A0A1B0GUT2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LINC00959A0A1B0GUT2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 ZNRF2P2-203ENST00000454624 420 ntBASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC00959A0A1B0GUT2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00959A0A1B0GUT2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LINC00959A0A1B0GUT2 AL359504.2-201ENST00000605506 1601 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms