Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV13-1A0A0B4J241 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV13-1A0A0B4J241 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV13-1A0A0B4J241 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV13-1A0A0B4J241 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV13-1A0A0B4J241 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV13-1A0A0B4J241 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV13-1A0A0B4J241 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV13-1A0A0B4J241 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV13-1A0A0B4J241 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.77■□□□□ 0.27
TRAV13-1A0A0B4J241 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV13-1A0A0B4J241 AC087741.3-201ENST00000624270 1347 ntBASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV13-1A0A0B4J241 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 AC044849.2-201ENST00000606596 710 ntBASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV13-1A0A0B4J241 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 AC093323.1-202ENST00000635031 2045 ntBASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV13-1A0A0B4J241 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 ERN1-208ENST00000606895 2068 ntBASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRAV13-1A0A0B4J241 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV13-1A0A0B4J241 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 AC010501.1-201ENST00000606270 1962 ntBASIC16.71■□□□□ 0.27
TRAV13-1A0A0B4J241 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV13-1A0A0B4J241 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV13-1A0A0B4J241 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms