Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 AL359504.2-201ENST00000605506 1601 ntBASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IGHV3-43A0A0B4J1X8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
IGHV3-43A0A0B4J1X8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 ERN1-208ENST00000606895 2068 ntBASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
IGHV3-43A0A0B4J1X8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
IGHV3-43A0A0B4J1X8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.11■□□□□ 0.81
IGHV3-43A0A0B4J1X8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IGHV3-43A0A0B4J1X8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 AC126177.7-201ENST00000547904 679 ntBASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGHV3-43A0A0B4J1X8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGHV3-43A0A0B4J1X8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGHV3-43A0A0B4J1X8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.08■□□□□ 0.81
IGHV3-43A0A0B4J1X8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
IGHV3-43A0A0B4J1X8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGHV3-43A0A0B4J1X8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IGHV3-43A0A0B4J1X8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IGHV3-43A0A0B4J1X8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.07■□□□□ 0.8
IGHV3-43A0A0B4J1X8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGHV3-43A0A0B4J1X8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
IGHV3-43A0A0B4J1X8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 MIR639-201ENST00000384974 98 ntBASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.05■□□□□ 0.8
IGHV3-43A0A0B4J1X8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 AC020928.2-201ENST00000588717 2197 ntBASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IGHV3-43A0A0B4J1X8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.03■□□□□ 0.8
IGHV3-43A0A0B4J1X8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms