Protein–RNA interactions for Protein: A0A0B4J1U7

IGHV6-1, Immunoglobulin heavy variable 6-1, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1A0A0B4J1U7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV6-1A0A0B4J1U7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV6-1A0A0B4J1U7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV6-1A0A0B4J1U7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV6-1A0A0B4J1U7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV6-1A0A0B4J1U7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 CAHM-201ENST00000604200 896 ntBASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV6-1A0A0B4J1U7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV6-1A0A0B4J1U7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 MIR762-201ENST00000390236 83 ntBASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV6-1A0A0B4J1U7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 AC097358.2-201ENST00000607541 1159 ntBASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV6-1A0A0B4J1U7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV6-1A0A0B4J1U7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV6-1A0A0B4J1U7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
IGHV6-1A0A0B4J1U7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV6-1A0A0B4J1U7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 AC108673.1-201ENST00000510422 1159 ntBASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC13.95□□□□□ -0.18
IGHV6-1A0A0B4J1U7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV6-1A0A0B4J1U7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV6-1A0A0B4J1U7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV6-1A0A0B4J1U7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 1191.9 ms