Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh7A0A0A6YY83 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdh7A0A0A6YY83 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh7A0A0A6YY83 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh7A0A0A6YY83 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh7A0A0A6YY83 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh7A0A0A6YY83 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh7A0A0A6YY83 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh7A0A0A6YY83 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdh7A0A0A6YY83 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pcdh7A0A0A6YY83 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh7A0A0A6YY83 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh7A0A0A6YY83 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh7A0A0A6YY83 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Pcdh7A0A0A6YY83 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh7A0A0A6YY83 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh7A0A0A6YY83 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh7A0A0A6YY83 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh7A0A0A6YY83 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdh7A0A0A6YY83 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Pcdh7A0A0A6YY83 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh7A0A0A6YY83 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh7A0A0A6YY83 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh7A0A0A6YY83 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Gm22567-201ENSMUST00000175542 342 ntBASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh7A0A0A6YY83 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh7A0A0A6YY83 Gm27502-201ENSMUST00000183495 199 ntBASIC22.76■■□□□ 1.23
Pcdh7A0A0A6YY83 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.76■■□□□ 1.23
Pcdh7A0A0A6YY83 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh7A0A0A6YY83 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Pcdh7A0A0A6YY83 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh7A0A0A6YY83 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Gm14523-201ENSMUST00000117260 558 ntBASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh7A0A0A6YY83 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh7A0A0A6YY83 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdh7A0A0A6YY83 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.74■■□□□ 1.23
Pcdh7A0A0A6YY83 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.73■■□□□ 1.23
Pcdh7A0A0A6YY83 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh7A0A0A6YY83 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh7A0A0A6YY83 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh7A0A0A6YY83 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh7A0A0A6YY83 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh7A0A0A6YY83 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh7A0A0A6YY83 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh7A0A0A6YY83 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh7A0A0A6YY83 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh7A0A0A6YY83 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdh7A0A0A6YY83 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdh7A0A0A6YY83 Gm7332-201ENSMUST00000118351 454 ntBASIC22.7■■□□□ 1.22
Pcdh7A0A0A6YY83 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.7■■□□□ 1.22
Pcdh7A0A0A6YY83 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Pcdh7A0A0A6YY83 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh7A0A0A6YY83 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.68■■□□□ 1.22
Pcdh7A0A0A6YY83 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms