Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28778A0A087WSK7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28778A0A087WSK7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm28778A0A087WSK7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28778A0A087WSK7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28778A0A087WSK7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm28778A0A087WSK7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm28778A0A087WSK7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28778A0A087WSK7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.94■□□□□ 0.46
Gm28778A0A087WSK7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28778A0A087WSK7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28778A0A087WSK7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28778A0A087WSK7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.93■□□□□ 0.46
Gm28778A0A087WSK7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28778A0A087WSK7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm28778A0A087WSK7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Cap2-205ENSMUST00000225824 1634 ntBASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28778A0A087WSK7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm28778A0A087WSK7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28778A0A087WSK7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28778A0A087WSK7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28778A0A087WSK7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28778A0A087WSK7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28778A0A087WSK7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28778A0A087WSK7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28778A0A087WSK7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms