Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Peli2-204ENSMUST00000226513 1320 ntBASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-4A0A075B654 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav3-4A0A075B654 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav3-4A0A075B654 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav3-4A0A075B654 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-4A0A075B654 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-4A0A075B654 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-4A0A075B654 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-4A0A075B654 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-4A0A075B654 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav3-4A0A075B654 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-4A0A075B654 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-4A0A075B654 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-4A0A075B654 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-4A0A075B654 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Gm17082-201ENSMUST00000166043 1091 ntBASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3-4A0A075B654 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Iqck-206ENSMUST00000208658 2891 ntBASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3-4A0A075B654 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3-4A0A075B654 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav3-4A0A075B654 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-4A0A075B654 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-4A0A075B654 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-4A0A075B654 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav3-4A0A075B654 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav3-4A0A075B654 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-4A0A075B654 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-4A0A075B654 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav3-4A0A075B654 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav3-4A0A075B654 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms