Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb1S4R1E0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb1S4R1E0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb1S4R1E0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb1S4R1E0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb1S4R1E0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
H2afb1S4R1E0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
H2afb1S4R1E0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
H2afb1S4R1E0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.03■□□□□ 0.8
H2afb1S4R1E0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1S4R1E0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb1S4R1E0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb1S4R1E0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H2afb1S4R1E0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
H2afb1S4R1E0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb1S4R1E0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20■□□□□ 0.79
H2afb1S4R1E0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb1S4R1E0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
H2afb1S4R1E0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1S4R1E0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H2afb1S4R1E0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1S4R1E0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb1S4R1E0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
H2afb1S4R1E0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb1S4R1E0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Gm4799-201ENSMUST00000095396 657 ntBASIC19.96■□□□□ 0.79
H2afb1S4R1E0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb1S4R1E0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1S4R1E0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1S4R1E0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1S4R1E0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1S4R1E0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb1S4R1E0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
H2afb1S4R1E0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
H2afb1S4R1E0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb1S4R1E0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.93■□□□□ 0.78
H2afb1S4R1E0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.93■□□□□ 0.78
H2afb1S4R1E0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb1S4R1E0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb1S4R1E0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb1S4R1E0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb1S4R1E0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb1S4R1E0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms