Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh20Q9Z0M3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh20Q9Z0M3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh20Q9Z0M3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh20Q9Z0M3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdh20Q9Z0M3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh20Q9Z0M3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdh20Q9Z0M3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh20Q9Z0M3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh20Q9Z0M3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh20Q9Z0M3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.51■□□□□ 0.87
Cdh20Q9Z0M3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdh20Q9Z0M3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh20Q9Z0M3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh20Q9Z0M3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh20Q9Z0M3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdh20Q9Z0M3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh20Q9Z0M3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh20Q9Z0M3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh20Q9Z0M3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cdh20Q9Z0M3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh20Q9Z0M3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh20Q9Z0M3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh20Q9Z0M3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cdh20Q9Z0M3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cdh20Q9Z0M3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.47■□□□□ 0.87
Cdh20Q9Z0M3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh20Q9Z0M3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
Cdh20Q9Z0M3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.46■□□□□ 0.87
Cdh20Q9Z0M3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh20Q9Z0M3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh20Q9Z0M3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.45■□□□□ 0.87
Cdh20Q9Z0M3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.45■□□□□ 0.87
Cdh20Q9Z0M3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh20Q9Z0M3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh20Q9Z0M3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms