Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA9Q9Y5G4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA9Q9Y5G4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA9Q9Y5G4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA9Q9Y5G4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGA9Q9Y5G4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGA9Q9Y5G4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGA9Q9Y5G4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.95■■□□□ 1.26
PCDHGA9Q9Y5G4 MIR3960-201ENST00000583311 91 ntBASIC22.95■■□□□ 1.26
PCDHGA9Q9Y5G4 AL451085.2-201ENST00000605085 799 ntBASIC22.95■■□□□ 1.26
PCDHGA9Q9Y5G4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.94■■□□□ 1.26
PCDHGA9Q9Y5G4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
PCDHGA9Q9Y5G4 BHLHE23-202ENST00000612929 1109 ntBASIC22.93■■□□□ 1.26
PCDHGA9Q9Y5G4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA9Q9Y5G4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGA9Q9Y5G4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGA9Q9Y5G4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA9Q9Y5G4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGA9Q9Y5G4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGA9Q9Y5G4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGA9Q9Y5G4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDHGA9Q9Y5G4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA9Q9Y5G4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGA9Q9Y5G4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDHGA9Q9Y5G4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGA9Q9Y5G4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PCDHGA9Q9Y5G4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGA9Q9Y5G4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDHGA9Q9Y5G4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGA9Q9Y5G4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGA9Q9Y5G4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
PCDHGA9Q9Y5G4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGA9Q9Y5G4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGA9Q9Y5G4 SPCS2P3-201ENST00000500401 656 ntBASIC22.88■■□□□ 1.25
PCDHGA9Q9Y5G4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHGA9Q9Y5G4 MIR6765-201ENST00000614092 87 ntBASIC22.88■■□□□ 1.25
PCDHGA9Q9Y5G4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 AC010980.1-201ENST00000587192 1142 ntBASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGA9Q9Y5G4 AC139795.1-202ENST00000500444 432 ntBASIC22.86■■□□□ 1.25
PCDHGA9Q9Y5G4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGA9Q9Y5G4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA9Q9Y5G4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA9Q9Y5G4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA9Q9Y5G4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHGA9Q9Y5G4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGA9Q9Y5G4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGA9Q9Y5G4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGA9Q9Y5G4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGA9Q9Y5G4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
PCDHGA9Q9Y5G4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGA9Q9Y5G4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 AC018755.3-202ENST00000596210 929 ntBASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 AP002414.2-202ENST00000590929 1450 ntBASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGA9Q9Y5G4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 YBX1P4-201ENST00000392794 808 ntBASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 DRD5P2-201ENST00000421395 2012 ntBASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 AL139393.2-201ENST00000608721 2025 ntBASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA9Q9Y5G4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 AL121749.1-202ENST00000609313 2153 ntBASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHGA9Q9Y5G4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA9Q9Y5G4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA9Q9Y5G4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PCDHGA9Q9Y5G4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms