Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA6Q9UN73 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHA6Q9UN73 ABHD17AP5-201ENST00000580133 923 ntBASIC28.26■■■□□ 2.11
PCDHA6Q9UN73 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHA6Q9UN73 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDHA6Q9UN73 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.25■■■□□ 2.11
PCDHA6Q9UN73 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
PCDHA6Q9UN73 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.24■■■□□ 2.11
PCDHA6Q9UN73 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.24■■■□□ 2.11
PCDHA6Q9UN73 AP004609.3-201ENST00000610705 1884 ntBASIC28.24■■■□□ 2.11
PCDHA6Q9UN73 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA6Q9UN73 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHA6Q9UN73 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHA6Q9UN73 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.23■■■□□ 2.11
PCDHA6Q9UN73 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.23■■■□□ 2.11
PCDHA6Q9UN73 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
PCDHA6Q9UN73 SMPD5-203ENST00000639008 1464 ntBASIC28.22■■■□□ 2.11
PCDHA6Q9UN73 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHA6Q9UN73 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDHA6Q9UN73 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHA6Q9UN73 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.21■■■□□ 2.11
PCDHA6Q9UN73 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA6Q9UN73 AL359504.2-201ENST00000605506 1601 ntBASIC28.21■■■□□ 2.11
PCDHA6Q9UN73 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA6Q9UN73 AC142472.1-201ENST00000612013 1741 ntBASIC28.21■■■□□ 2.11
PCDHA6Q9UN73 AC025884.2-201ENST00000553429 711 ntBASIC28.2■■■□□ 2.1
PCDHA6Q9UN73 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
PCDHA6Q9UN73 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PCDHA6Q9UN73 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHA6Q9UN73 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDHA6Q9UN73 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
PCDHA6Q9UN73 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHA6Q9UN73 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHA6Q9UN73 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.17■■■□□ 2.1
PCDHA6Q9UN73 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.16■■■□□ 2.1
PCDHA6Q9UN73 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDHA6Q9UN73 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 AC007029.1-201ENST00000604183 313 ntBASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.15■■■□□ 2.1
PCDHA6Q9UN73 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA6Q9UN73 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA6Q9UN73 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA6Q9UN73 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA6Q9UN73 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHA6Q9UN73 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA6Q9UN73 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA6Q9UN73 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA6Q9UN73 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
PCDHA6Q9UN73 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
PCDHA6Q9UN73 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 U85056.1-201ENST00000616429 682 ntBASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA6Q9UN73 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA6Q9UN73 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA6Q9UN73 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA6Q9UN73 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA6Q9UN73 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.1■■■□□ 2.09
PCDHA6Q9UN73 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.09■■■□□ 2.09
PCDHA6Q9UN73 NTF6A-201ENST00000591175 560 ntBASIC28.09■■■□□ 2.09
PCDHA6Q9UN73 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHA6Q9UN73 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHA6Q9UN73 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA6Q9UN73 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
PCDHA6Q9UN73 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
PCDHA6Q9UN73 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDHA6Q9UN73 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA6Q9UN73 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms