Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB8Q9UN66 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB8Q9UN66 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHB8Q9UN66 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB8Q9UN66 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB8Q9UN66 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHB8Q9UN66 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB8Q9UN66 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB8Q9UN66 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB8Q9UN66 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB8Q9UN66 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB8Q9UN66 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
PCDHB8Q9UN66 AL449106.1-201ENST00000608517 1980 ntBASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB8Q9UN66 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB8Q9UN66 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PCDHB8Q9UN66 BX255925.1-201ENST00000566954 1854 ntBASIC26.22■■□□□ 1.79
PCDHB8Q9UN66 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB8Q9UN66 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHB8Q9UN66 DUX4L18-201ENST00000553347 1267 ntBASIC26.22■■□□□ 1.79
PCDHB8Q9UN66 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB8Q9UN66 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB8Q9UN66 DUX4L9-201ENST00000449051 1259 ntBASIC26.2■■□□□ 1.78
PCDHB8Q9UN66 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHB8Q9UN66 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB8Q9UN66 AC142086.6-201ENST00000621154 1765 ntBASIC26.19■■□□□ 1.78
PCDHB8Q9UN66 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB8Q9UN66 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB8Q9UN66 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB8Q9UN66 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB8Q9UN66 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PCDHB8Q9UN66 SPCS2P3-201ENST00000500401 656 ntBASIC26.18■■□□□ 1.78
PCDHB8Q9UN66 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PCDHB8Q9UN66 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB8Q9UN66 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB8Q9UN66 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB8Q9UN66 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.17■■□□□ 1.78
PCDHB8Q9UN66 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
PCDHB8Q9UN66 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB8Q9UN66 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHB8Q9UN66 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PCDHB8Q9UN66 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHB8Q9UN66 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHB8Q9UN66 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB8Q9UN66 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHB8Q9UN66 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB8Q9UN66 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHB8Q9UN66 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
PCDHB8Q9UN66 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB8Q9UN66 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
PCDHB8Q9UN66 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHB8Q9UN66 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB8Q9UN66 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB8Q9UN66 MIR6765-201ENST00000614092 87 ntBASIC26.1■■□□□ 1.77
PCDHB8Q9UN66 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PCDHB8Q9UN66 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB8Q9UN66 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms