Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 AC142472.1-201ENST00000612013 1741 ntBASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A20Q9NP91 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SLC6A20Q9NP91 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC6A20Q9NP91 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 AC025884.2-201ENST00000553429 711 ntBASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A20Q9NP91 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A20Q9NP91 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A20Q9NP91 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SLC6A20Q9NP91 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SLC6A20Q9NP91 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.63■■□□□ 1.37
SLC6A20Q9NP91 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A20Q9NP91 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
SLC6A20Q9NP91 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A20Q9NP91 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A20Q9NP91 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC6A20Q9NP91 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 SMPD5-203ENST00000639008 1464 ntBASIC23.61■■□□□ 1.37
SLC6A20Q9NP91 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A20Q9NP91 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.6■■□□□ 1.37
SLC6A20Q9NP91 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.6■■□□□ 1.37
SLC6A20Q9NP91 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A20Q9NP91 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC6A20Q9NP91 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A20Q9NP91 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A20Q9NP91 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A20Q9NP91 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A20Q9NP91 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A20Q9NP91 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A20Q9NP91 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A20Q9NP91 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.58■■□□□ 1.37
SLC6A20Q9NP91 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A20Q9NP91 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC6A20Q9NP91 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A20Q9NP91 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A20Q9NP91 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A20Q9NP91 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A20Q9NP91 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.57■■□□□ 1.36
SLC6A20Q9NP91 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A20Q9NP91 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A20Q9NP91 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A20Q9NP91 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SLC6A20Q9NP91 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A20Q9NP91 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A20Q9NP91 AC007029.1-201ENST00000604183 313 ntBASIC23.56■■□□□ 1.36
SLC6A20Q9NP91 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SLC6A20Q9NP91 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A20Q9NP91 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A20Q9NP91 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A20Q9NP91 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A20Q9NP91 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A20Q9NP91 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A20Q9NP91 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC6A20Q9NP91 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.52■■□□□ 1.36
SLC6A20Q9NP91 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A20Q9NP91 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A20Q9NP91 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A20Q9NP91 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SLC6A20Q9NP91 MIR3960-201ENST00000583311 91 ntBASIC23.51■■□□□ 1.35
SLC6A20Q9NP91 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A20Q9NP91 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A20Q9NP91 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC6A20Q9NP91 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A20Q9NP91 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.5■■□□□ 1.35
SLC6A20Q9NP91 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SLC6A20Q9NP91 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.5■■□□□ 1.35
SLC6A20Q9NP91 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 RP9P-202ENST00000450133 1212 ntBASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SLC6A20Q9NP91 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms