Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Herpud1Q9JJK5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Herpud1Q9JJK5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Herpud1Q9JJK5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Herpud1Q9JJK5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Herpud1Q9JJK5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Herpud1Q9JJK5 Gm4799-201ENSMUST00000095396 657 ntBASIC18.42■□□□□ 0.54
Herpud1Q9JJK5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Herpud1Q9JJK5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Herpud1Q9JJK5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Herpud1Q9JJK5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.4■□□□□ 0.54
Herpud1Q9JJK5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Herpud1Q9JJK5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Herpud1Q9JJK5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Herpud1Q9JJK5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herpud1Q9JJK5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herpud1Q9JJK5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Herpud1Q9JJK5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herpud1Q9JJK5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 Gm7432-201ENSMUST00000210343 879 ntBASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.36■□□□□ 0.53
Herpud1Q9JJK5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Gm9812-201ENSMUST00000061934 968 ntBASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Herpud1Q9JJK5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herpud1Q9JJK5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Herpud1Q9JJK5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 Mir3960-201ENSMUST00000198213 73 ntBASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Herpud1Q9JJK5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.32■□□□□ 0.52
Herpud1Q9JJK5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 Gm11599-201ENSMUST00000118720 878 ntBASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Herpud1Q9JJK5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Herpud1Q9JJK5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Herpud1Q9JJK5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms