Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.6■■■□□ 2.33
CWC22Q9HCG8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CWC22Q9HCG8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CWC22Q9HCG8 AC012354.3-201ENST00000623734 483 ntBASIC29.6■■■□□ 2.33
CWC22Q9HCG8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.6■■■□□ 2.33
CWC22Q9HCG8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CWC22Q9HCG8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CWC22Q9HCG8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CWC22Q9HCG8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
CWC22Q9HCG8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CWC22Q9HCG8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.58■■■□□ 2.33
CWC22Q9HCG8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.58■■■□□ 2.33
CWC22Q9HCG8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.57■■■□□ 2.32
CWC22Q9HCG8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.57■■■□□ 2.32
CWC22Q9HCG8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CWC22Q9HCG8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CWC22Q9HCG8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
CWC22Q9HCG8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.56■■■□□ 2.32
CWC22Q9HCG8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CWC22Q9HCG8 AC110285.7-201ENST00000624417 1536 ntBASIC29.55■■■□□ 2.32
CWC22Q9HCG8 AC145676.1-201ENST00000514988 2004 ntBASIC29.55■■■□□ 2.32
CWC22Q9HCG8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CWC22Q9HCG8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.55■■■□□ 2.32
CWC22Q9HCG8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CWC22Q9HCG8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CWC22Q9HCG8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.54■■■□□ 2.32
CWC22Q9HCG8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CWC22Q9HCG8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.52■■■□□ 2.32
CWC22Q9HCG8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CWC22Q9HCG8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CWC22Q9HCG8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.52■■■□□ 2.32
CWC22Q9HCG8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
CWC22Q9HCG8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.51■■■□□ 2.31
CWC22Q9HCG8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.5■■■□□ 2.31
CWC22Q9HCG8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.5■■■□□ 2.31
CWC22Q9HCG8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CWC22Q9HCG8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
CWC22Q9HCG8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CWC22Q9HCG8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CWC22Q9HCG8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.48■■■□□ 2.31
CWC22Q9HCG8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CWC22Q9HCG8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
CWC22Q9HCG8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
CWC22Q9HCG8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.46■■■□□ 2.31
CWC22Q9HCG8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CWC22Q9HCG8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.45■■■□□ 2.31
CWC22Q9HCG8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.45■■■□□ 2.3
CWC22Q9HCG8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
CWC22Q9HCG8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 AC148477.6-201ENST00000623746 465 ntBASIC29.43■■■□□ 2.3
CWC22Q9HCG8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CWC22Q9HCG8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CWC22Q9HCG8 AC060814.1-201ENST00000554326 538 ntBASIC29.42■■■□□ 2.3
CWC22Q9HCG8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CWC22Q9HCG8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CWC22Q9HCG8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CWC22Q9HCG8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CWC22Q9HCG8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CWC22Q9HCG8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.41■■■□□ 2.3
CWC22Q9HCG8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CWC22Q9HCG8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.41■■■□□ 2.3
CWC22Q9HCG8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.41■■■□□ 2.3
CWC22Q9HCG8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.4■■■□□ 2.3
CWC22Q9HCG8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 AL033527.3-201ENST00000566366 1196 ntBASIC29.4■■■□□ 2.3
CWC22Q9HCG8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CWC22Q9HCG8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CWC22Q9HCG8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CWC22Q9HCG8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.38■■■□□ 2.29
CWC22Q9HCG8 AC020928.2-201ENST00000588717 2197 ntBASIC29.37■■■□□ 2.29
CWC22Q9HCG8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CWC22Q9HCG8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CWC22Q9HCG8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms