Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.28■□□□□ 0.2
SND1-IT1Q9HBX3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SND1-IT1Q9HBX3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SND1-IT1Q9HBX3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SND1-IT1Q9HBX3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
SND1-IT1Q9HBX3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.27■□□□□ 0.2
SND1-IT1Q9HBX3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SND1-IT1Q9HBX3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SND1-IT1Q9HBX3 AP004609.3-201ENST00000610705 1884 ntBASIC16.27■□□□□ 0.19
SND1-IT1Q9HBX3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SND1-IT1Q9HBX3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SND1-IT1Q9HBX3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SND1-IT1Q9HBX3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SND1-IT1Q9HBX3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SND1-IT1Q9HBX3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SND1-IT1Q9HBX3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SND1-IT1Q9HBX3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SND1-IT1Q9HBX3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 ERN1-208ENST00000606895 2068 ntBASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SND1-IT1Q9HBX3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 AC108673.1-201ENST00000510422 1159 ntBASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 LINC00273-201ENST00000539813 1452 ntBASIC16.22■□□□□ 0.19
SND1-IT1Q9HBX3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SND1-IT1Q9HBX3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SND1-IT1Q9HBX3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SND1-IT1Q9HBX3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.21■□□□□ 0.19
SND1-IT1Q9HBX3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
SND1-IT1Q9HBX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 AC005559.1-201ENST00000589661 871 ntBASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SND1-IT1Q9HBX3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SND1-IT1Q9HBX3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SND1-IT1Q9HBX3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SND1-IT1Q9HBX3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.19■□□□□ 0.18
SND1-IT1Q9HBX3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SND1-IT1Q9HBX3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SND1-IT1Q9HBX3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SND1-IT1Q9HBX3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.17■□□□□ 0.18
SND1-IT1Q9HBX3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SND1-IT1Q9HBX3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SND1-IT1Q9HBX3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SND1-IT1Q9HBX3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SND1-IT1Q9HBX3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SND1-IT1Q9HBX3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.16■□□□□ 0.18
SND1-IT1Q9HBX3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SND1-IT1Q9HBX3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SND1-IT1Q9HBX3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms