Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNX25Q9H3E2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SNX25Q9H3E2 MIR3960-201ENST00000583311 91 ntBASIC26.21■■□□□ 1.79
SNX25Q9H3E2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SNX25Q9H3E2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.2■■□□□ 1.79
SNX25Q9H3E2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.2■■□□□ 1.79
SNX25Q9H3E2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SNX25Q9H3E2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNX25Q9H3E2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNX25Q9H3E2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SNX25Q9H3E2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNX25Q9H3E2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SNX25Q9H3E2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.19■■□□□ 1.78
SNX25Q9H3E2 RP9P-202ENST00000450133 1212 ntBASIC26.19■■□□□ 1.78
SNX25Q9H3E2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.19■■□□□ 1.78
SNX25Q9H3E2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNX25Q9H3E2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SNX25Q9H3E2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SNX25Q9H3E2 AP004609.3-201ENST00000610705 1884 ntBASIC26.17■■□□□ 1.78
SNX25Q9H3E2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNX25Q9H3E2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
SNX25Q9H3E2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNX25Q9H3E2 AC142472.1-201ENST00000612013 1741 ntBASIC26.17■■□□□ 1.78
SNX25Q9H3E2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNX25Q9H3E2 NTF6A-201ENST00000591175 560 ntBASIC26.16■■□□□ 1.78
SNX25Q9H3E2 U85056.1-201ENST00000616429 682 ntBASIC26.16■■□□□ 1.78
SNX25Q9H3E2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNX25Q9H3E2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNX25Q9H3E2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNX25Q9H3E2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNX25Q9H3E2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 AC093536.1-201ENST00000569153 554 ntBASIC26.15■■□□□ 1.78
SNX25Q9H3E2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SNX25Q9H3E2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SNX25Q9H3E2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNX25Q9H3E2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 AC133552.2-201ENST00000619106 1032 ntBASIC26.13■■□□□ 1.77
SNX25Q9H3E2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNX25Q9H3E2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.12■■□□□ 1.77
SNX25Q9H3E2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.12■■□□□ 1.77
SNX25Q9H3E2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.12■■□□□ 1.77
SNX25Q9H3E2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNX25Q9H3E2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNX25Q9H3E2 AC026202.3-201ENST00000600805 1127 ntBASIC26.11■■□□□ 1.77
SNX25Q9H3E2 AC009831.1-201ENST00000580420 1582 ntBASIC26.11■■□□□ 1.77
SNX25Q9H3E2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SNX25Q9H3E2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNX25Q9H3E2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNX25Q9H3E2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNX25Q9H3E2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNX25Q9H3E2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
SNX25Q9H3E2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SNX25Q9H3E2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.09■■□□□ 1.77
SNX25Q9H3E2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.08■■□□□ 1.77
SNX25Q9H3E2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.76
SNX25Q9H3E2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SNX25Q9H3E2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNX25Q9H3E2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNX25Q9H3E2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.05■■□□□ 1.76
SNX25Q9H3E2 RAP2CP1-202ENST00000605179 643 ntBASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms