Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.54■■□□□ 1.84
NUCKS1Q9H1E3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NUCKS1Q9H1E3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NUCKS1Q9H1E3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NUCKS1Q9H1E3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
NUCKS1Q9H1E3 AC020928.2-201ENST00000588717 2197 ntBASIC26.53■■□□□ 1.84
NUCKS1Q9H1E3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NUCKS1Q9H1E3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NUCKS1Q9H1E3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.52■■□□□ 1.84
NUCKS1Q9H1E3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NUCKS1Q9H1E3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
NUCKS1Q9H1E3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NUCKS1Q9H1E3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
NUCKS1Q9H1E3 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.5■■□□□ 1.83
NUCKS1Q9H1E3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NUCKS1Q9H1E3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 MIR639-201ENST00000384974 98 ntBASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NUCKS1Q9H1E3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NUCKS1Q9H1E3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.47■■□□□ 1.83
NUCKS1Q9H1E3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
NUCKS1Q9H1E3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
NUCKS1Q9H1E3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.46■■□□□ 1.83
NUCKS1Q9H1E3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
NUCKS1Q9H1E3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NUCKS1Q9H1E3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
NUCKS1Q9H1E3 AC135731.1-201ENST00000569415 2548 ntBASIC26.45■■□□□ 1.83
NUCKS1Q9H1E3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.45■■□□□ 1.83
NUCKS1Q9H1E3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NUCKS1Q9H1E3 AC008813.1-201ENST00000536597 885 ntBASIC26.45■■□□□ 1.82
NUCKS1Q9H1E3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
NUCKS1Q9H1E3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.44■■□□□ 1.82
NUCKS1Q9H1E3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NUCKS1Q9H1E3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
NUCKS1Q9H1E3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NUCKS1Q9H1E3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NUCKS1Q9H1E3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.41■■□□□ 1.82
NUCKS1Q9H1E3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.41■■□□□ 1.82
NUCKS1Q9H1E3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
NUCKS1Q9H1E3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
NUCKS1Q9H1E3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.4■■□□□ 1.82
NUCKS1Q9H1E3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NUCKS1Q9H1E3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.4■■□□□ 1.82
NUCKS1Q9H1E3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NUCKS1Q9H1E3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.39■■□□□ 1.82
NUCKS1Q9H1E3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.39■■□□□ 1.81
NUCKS1Q9H1E3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NUCKS1Q9H1E3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 AC010501.1-201ENST00000606270 1962 ntBASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NUCKS1Q9H1E3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 MIR4449-201ENST00000578365 66 ntBASIC26.37■■□□□ 1.81
NUCKS1Q9H1E3 AC148477.6-201ENST00000623746 465 ntBASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms