Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CYSTM1Q9H1C7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CYSTM1Q9H1C7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CYSTM1Q9H1C7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CYSTM1Q9H1C7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 AC092803.2-201ENST00000564287 1899 ntBASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CYSTM1Q9H1C7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC14.57□□□□□ -0.08
CYSTM1Q9H1C7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CYSTM1Q9H1C7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 AL135925.1-201ENST00000605920 1701 ntBASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC14.55□□□□□ -0.08
CYSTM1Q9H1C7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CYSTM1Q9H1C7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 AL139125.2-201ENST00000623134 1869 ntBASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 DUSP8P4-201ENST00000399538 1761 ntBASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CYSTM1Q9H1C7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CYSTM1Q9H1C7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
CYSTM1Q9H1C7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.52□□□□□ -0.08
CYSTM1Q9H1C7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 AC092667.1-201ENST00000434301 2586 ntBASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CYSTM1Q9H1C7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CYSTM1Q9H1C7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.5□□□□□ -0.09
CYSTM1Q9H1C7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CYSTM1Q9H1C7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms