Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d3Q9CSV6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sft2d3Q9CSV6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sft2d3Q9CSV6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
Sft2d3Q9CSV6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d3Q9CSV6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sft2d3Q9CSV6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d3Q9CSV6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sft2d3Q9CSV6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Sft2d3Q9CSV6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d3Q9CSV6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d3Q9CSV6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d3Q9CSV6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d3Q9CSV6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d3Q9CSV6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d3Q9CSV6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sft2d3Q9CSV6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 Gm27502-201ENSMUST00000183495 199 ntBASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 Terc-201ENSMUST00000082862 423 ntBASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sft2d3Q9CSV6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sft2d3Q9CSV6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sft2d3Q9CSV6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.77■□□□□ 0.59
Sft2d3Q9CSV6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Sft2d3Q9CSV6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.76■□□□□ 0.59
Sft2d3Q9CSV6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sft2d3Q9CSV6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sft2d3Q9CSV6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms