Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP4-4Q9BYR3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP4-4Q9BYR3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 FGF21-201ENST00000222157 885 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AL355143.1-201ENST00000407101 841 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AL133380.1-201ENST00000506013 324 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC016550.3-201ENST00000515706 767 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC005632.2-201ENST00000564271 828 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC109809.1-201ENST00000619665 545 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AL391121.1-201ENST00000607967 1349 ntBASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP4-4Q9BYR3 LINC02228-203ENST00000641970 1355 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC073310.1-201ENST00000423226 1033 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 PAICSP2-201ENST00000429118 1150 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 USP9YP14-201ENST00000430663 563 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AL162393.1-201ENST00000437852 946 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 RSL24D1P2-201ENST00000445584 366 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 MTND2P32-201ENST00000521584 1038 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 SRPK2P-201ENST00000523408 1100 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 LINC00564-201ENST00000567258 1119 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC005771.1-201ENST00000585581 349 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 AC010326.4-201ENST00000604665 891 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 MFSD8-256ENST00000641949 1640 ntBASIC4.93□□□□□ -1.62
KRTAP4-4Q9BYR3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 MTND4P32-201ENST00000437189 1237 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AP001885.1-202ENST00000444002 1255 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC005951.1-201ENST00000576706 485 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AL357094.1-201ENST00000603845 844 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AL049536.1-201ENST00000625043 744 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 AC007228.2-201ENST00000602145 1328 ntBASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KRTAP4-4Q9BYR3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms