Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.75■□□□□ 0.91
CMSS1Q9BQ75 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CMSS1Q9BQ75 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CMSS1Q9BQ75 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 AL162393.1-201ENST00000437852 946 ntBASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CMSS1Q9BQ75 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CMSS1Q9BQ75 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CMSS1Q9BQ75 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.71■□□□□ 0.91
CMSS1Q9BQ75 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CMSS1Q9BQ75 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CMSS1Q9BQ75 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CMSS1Q9BQ75 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.69■□□□□ 0.9
CMSS1Q9BQ75 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMSS1Q9BQ75 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 AC021231.2-201ENST00000594613 730 ntBASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.67■□□□□ 0.9
CMSS1Q9BQ75 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMSS1Q9BQ75 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMSS1Q9BQ75 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CMSS1Q9BQ75 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CMSS1Q9BQ75 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CMSS1Q9BQ75 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CMSS1Q9BQ75 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.64■□□□□ 0.89
CMSS1Q9BQ75 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.64■□□□□ 0.89
CMSS1Q9BQ75 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CMSS1Q9BQ75 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.64■□□□□ 0.89
CMSS1Q9BQ75 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CMSS1Q9BQ75 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMSS1Q9BQ75 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMSS1Q9BQ75 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMSS1Q9BQ75 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMSS1Q9BQ75 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms