Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thumpd1Q99J36 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thumpd1Q99J36 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Thumpd1Q99J36 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Thumpd1Q99J36 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Thumpd1Q99J36 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Thumpd1Q99J36 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.82■□□□□ 0.76
Thumpd1Q99J36 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Thumpd1Q99J36 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Nkain2-201ENSMUST00000092602 558 ntBASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd1Q99J36 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.79■□□□□ 0.76
Thumpd1Q99J36 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.78■□□□□ 0.76
Thumpd1Q99J36 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd1Q99J36 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.76
Thumpd1Q99J36 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Thumpd1Q99J36 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.77■□□□□ 0.75
Thumpd1Q99J36 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.76■□□□□ 0.75
Thumpd1Q99J36 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd1Q99J36 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd1Q99J36 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.73■□□□□ 0.75
Thumpd1Q99J36 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd1Q99J36 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd1Q99J36 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Thumpd1Q99J36 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Thumpd1Q99J36 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms