Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 DUX4L29-201ENST00000425409 679 ntBASIC21.81■■□□□ 1.08
CNN2Q99439 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNN2Q99439 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNN2Q99439 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CNN2Q99439 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNN2Q99439 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNN2Q99439 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNN2Q99439 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNN2Q99439 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CNN2Q99439 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CNN2Q99439 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNN2Q99439 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNN2Q99439 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNN2Q99439 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNN2Q99439 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNN2Q99439 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNN2Q99439 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNN2Q99439 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CNN2Q99439 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CNN2Q99439 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.76■■□□□ 1.07
CNN2Q99439 AC010501.1-201ENST00000606270 1962 ntBASIC21.76■■□□□ 1.07
CNN2Q99439 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNN2Q99439 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNN2Q99439 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNN2Q99439 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CNN2Q99439 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNN2Q99439 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.75■■□□□ 1.07
CNN2Q99439 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CNN2Q99439 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.75■■□□□ 1.07
CNN2Q99439 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.75■■□□□ 1.07
CNN2Q99439 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.75■■□□□ 1.07
CNN2Q99439 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNN2Q99439 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNN2Q99439 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.74■■□□□ 1.07
CNN2Q99439 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.74■■□□□ 1.07
CNN2Q99439 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CNN2Q99439 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNN2Q99439 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNN2Q99439 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CNN2Q99439 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.73■■□□□ 1.07
CNN2Q99439 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CNN2Q99439 ERN1-208ENST00000606895 2068 ntBASIC21.73■■□□□ 1.07
CNN2Q99439 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNN2Q99439 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.72■■□□□ 1.07
CNN2Q99439 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CNN2Q99439 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.72■■□□□ 1.07
CNN2Q99439 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.72■■□□□ 1.07
CNN2Q99439 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNN2Q99439 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.71■■□□□ 1.07
CNN2Q99439 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.71■■□□□ 1.07
CNN2Q99439 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.71■■□□□ 1.07
CNN2Q99439 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNN2Q99439 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CNN2Q99439 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNN2Q99439 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNN2Q99439 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNN2Q99439 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.7■■□□□ 1.06
CNN2Q99439 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNN2Q99439 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNN2Q99439 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CNN2Q99439 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNN2Q99439 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNN2Q99439 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNN2Q99439 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.68■■□□□ 1.06
CNN2Q99439 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.68■■□□□ 1.06
CNN2Q99439 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CNN2Q99439 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.67■■□□□ 1.06
CNN2Q99439 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.67■■□□□ 1.06
CNN2Q99439 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNN2Q99439 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.67■■□□□ 1.06
CNN2Q99439 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNN2Q99439 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.67■■□□□ 1.06
CNN2Q99439 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.66■■□□□ 1.06
CNN2Q99439 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNN2Q99439 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CNN2Q99439 AC093323.1-202ENST00000635031 2045 ntBASIC21.65■■□□□ 1.06
CNN2Q99439 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNN2Q99439 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNN2Q99439 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CNN2Q99439 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNN2Q99439 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNN2Q99439 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNN2Q99439 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.64■■□□□ 1.06
CNN2Q99439 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.64■■□□□ 1.06
CNN2Q99439 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNN2Q99439 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNN2Q99439 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNN2Q99439 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNN2Q99439 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNN2Q99439 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms