Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RAB40CQ96S21 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40CQ96S21 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB40CQ96S21 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB40CQ96S21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40CQ96S21 AC010501.1-201ENST00000606270 1962 ntBASIC19.77■□□□□ 0.76
RAB40CQ96S21 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB40CQ96S21 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB40CQ96S21 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAB40CQ96S21 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAB40CQ96S21 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.77■□□□□ 0.75
RAB40CQ96S21 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB40CQ96S21 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RAB40CQ96S21 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB40CQ96S21 WHAMMP3-201ENST00000611636 1609 ntBASIC19.76■□□□□ 0.75
RAB40CQ96S21 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40CQ96S21 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40CQ96S21 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB40CQ96S21 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB40CQ96S21 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB40CQ96S21 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RAB40CQ96S21 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAB40CQ96S21 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB40CQ96S21 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40CQ96S21 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40CQ96S21 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB40CQ96S21 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40CQ96S21 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40CQ96S21 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40CQ96S21 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40CQ96S21 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40CQ96S21 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
RAB40CQ96S21 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB40CQ96S21 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB40CQ96S21 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB40CQ96S21 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40CQ96S21 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40CQ96S21 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40CQ96S21 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40CQ96S21 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40CQ96S21 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40CQ96S21 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40CQ96S21 AC005559.1-201ENST00000589661 871 ntBASIC19.69■□□□□ 0.74
RAB40CQ96S21 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40CQ96S21 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB40CQ96S21 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB40CQ96S21 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RAB40CQ96S21 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB40CQ96S21 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40CQ96S21 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40CQ96S21 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB40CQ96S21 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40CQ96S21 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40CQ96S21 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB40CQ96S21 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40CQ96S21 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40CQ96S21 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB40CQ96S21 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40CQ96S21 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40CQ96S21 MIR6090-201ENST00000622481 60 ntBASIC19.67■□□□□ 0.74
RAB40CQ96S21 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40CQ96S21 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RAB40CQ96S21 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB40CQ96S21 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB40CQ96S21 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40CQ96S21 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40CQ96S21 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.66■□□□□ 0.74
RAB40CQ96S21 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40CQ96S21 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40CQ96S21 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40CQ96S21 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB40CQ96S21 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB40CQ96S21 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB40CQ96S21 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40CQ96S21 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB40CQ96S21 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40CQ96S21 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB40CQ96S21 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB40CQ96S21 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.64■□□□□ 0.73
RAB40CQ96S21 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB40CQ96S21 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB40CQ96S21 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 AL139125.2-201ENST00000623134 1869 ntBASIC19.64■□□□□ 0.73
RAB40CQ96S21 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 AC022211.4-201ENST00000625094 2161 ntBASIC19.64■□□□□ 0.73
RAB40CQ96S21 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms