Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A18Q96N87 MIR6765-201ENST00000614092 87 ntBASIC24.46■■□□□ 1.51
SLC6A18Q96N87 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A18Q96N87 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC6A18Q96N87 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 AL451085.2-201ENST00000605085 799 ntBASIC24.45■■□□□ 1.5
SLC6A18Q96N87 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 KRT8P33-201ENST00000508125 1423 ntBASIC24.44■■□□□ 1.5
SLC6A18Q96N87 WHAMMP3-201ENST00000611636 1609 ntBASIC24.43■■□□□ 1.5
SLC6A18Q96N87 AC139795.1-202ENST00000500444 432 ntBASIC24.43■■□□□ 1.5
SLC6A18Q96N87 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC6A18Q96N87 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 AC018755.3-202ENST00000596210 929 ntBASIC24.42■■□□□ 1.5
SLC6A18Q96N87 AL035685.1-201ENST00000636663 812 ntBASIC24.42■■□□□ 1.5
SLC6A18Q96N87 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 AC074183.2-201ENST00000623112 922 ntBASIC24.38■■□□□ 1.49
SLC6A18Q96N87 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 PVT1_1.1-201ENST00000615125 194 ntBASIC24.35■■□□□ 1.49
SLC6A18Q96N87 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 AC103834.1-201ENST00000520383 144 ntBASIC24.31■■□□□ 1.48
SLC6A18Q96N87 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 YBX1P4-201ENST00000392794 808 ntBASIC24.3■■□□□ 1.48
SLC6A18Q96N87 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms