Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PRICKLE1Q96MT3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PRICKLE1Q96MT3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PRICKLE1Q96MT3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRICKLE1Q96MT3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRICKLE1Q96MT3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PRICKLE1Q96MT3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRICKLE1Q96MT3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.37■■□□□ 1.65
PRICKLE1Q96MT3 AC135731.1-201ENST00000569415 2548 ntBASIC25.37■■□□□ 1.65
PRICKLE1Q96MT3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.37■■□□□ 1.65
PRICKLE1Q96MT3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.36■■□□□ 1.65
PRICKLE1Q96MT3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PRICKLE1Q96MT3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.36■■□□□ 1.65
PRICKLE1Q96MT3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PRICKLE1Q96MT3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PRICKLE1Q96MT3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.35■■□□□ 1.65
PRICKLE1Q96MT3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.35■■□□□ 1.65
PRICKLE1Q96MT3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.35■■□□□ 1.65
PRICKLE1Q96MT3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PRICKLE1Q96MT3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 AC009831.1-201ENST00000580420 1582 ntBASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRICKLE1Q96MT3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 RP9P-202ENST00000450133 1212 ntBASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PRICKLE1Q96MT3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRICKLE1Q96MT3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRICKLE1Q96MT3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PRICKLE1Q96MT3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PRICKLE1Q96MT3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRICKLE1Q96MT3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 KRT18P60-201ENST00000312876 1297 ntBASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 AC093536.1-201ENST00000569153 554 ntBASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 MIR3960-201ENST00000583311 91 ntBASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 AC026202.3-201ENST00000600805 1127 ntBASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PRICKLE1Q96MT3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PRICKLE1Q96MT3 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.3■■□□□ 1.64
PRICKLE1Q96MT3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRICKLE1Q96MT3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PRICKLE1Q96MT3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRICKLE1Q96MT3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PRICKLE1Q96MT3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.28■■□□□ 1.64
PRICKLE1Q96MT3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 AC133552.2-201ENST00000619106 1032 ntBASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.27■■□□□ 1.64
PRICKLE1Q96MT3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PRICKLE1Q96MT3 RAP2CP1-202ENST00000605179 643 ntBASIC25.26■■□□□ 1.63
PRICKLE1Q96MT3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
PRICKLE1Q96MT3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRICKLE1Q96MT3 AL592293.1-201ENST00000502889 1188 ntBASIC25.25■■□□□ 1.63
PRICKLE1Q96MT3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PRICKLE1Q96MT3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.25■■□□□ 1.63
PRICKLE1Q96MT3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PRICKLE1Q96MT3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PRICKLE1Q96MT3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 AC012354.3-201ENST00000623734 483 ntBASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
PRICKLE1Q96MT3 AC142472.1-201ENST00000612013 1741 ntBASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRICKLE1Q96MT3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRICKLE1Q96MT3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.22■■□□□ 1.63
PRICKLE1Q96MT3 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.22■■□□□ 1.63
PRICKLE1Q96MT3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRICKLE1Q96MT3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms