Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 DUX4L13-201ENST00000554103 1267 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L15-201ENST00000611059 1267 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L23-201ENST00000615195 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L24-201ENST00000617576 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L22-201ENST00000618238 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L20-201ENST00000619712 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L21-201ENST00000622058 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L10-201ENST00000622460 1267 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DUX4L25-201ENST00000624915 1269 ntBASIC18.39■□□□□ 0.53
MRPL53Q96EL3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL53Q96EL3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL53Q96EL3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL53Q96EL3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL53Q96EL3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 AC148477.6-201ENST00000623746 465 ntBASIC18.38■□□□□ 0.53
MRPL53Q96EL3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL53Q96EL3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPL53Q96EL3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPL53Q96EL3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL53Q96EL3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL53Q96EL3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL53Q96EL3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.36■□□□□ 0.53
MRPL53Q96EL3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL53Q96EL3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 AC135731.1-201ENST00000569415 2548 ntBASIC18.34■□□□□ 0.53
MRPL53Q96EL3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL53Q96EL3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL53Q96EL3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL53Q96EL3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MRPL53Q96EL3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.32■□□□□ 0.52
MRPL53Q96EL3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 MIR219A2-201ENST00000608502 1504 ntBASIC18.32■□□□□ 0.52
MRPL53Q96EL3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPL53Q96EL3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MRPL53Q96EL3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL53Q96EL3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPL53Q96EL3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPL53Q96EL3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MRPL53Q96EL3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL53Q96EL3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPL53Q96EL3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPL53Q96EL3 DUX4L11-201ENST00000611504 1267 ntBASIC18.29■□□□□ 0.52
MRPL53Q96EL3 DUX4L12-201ENST00000614593 1267 ntBASIC18.29■□□□□ 0.52
MRPL53Q96EL3 DUX4L14-201ENST00000621227 1267 ntBASIC18.29■□□□□ 0.52
MRPL53Q96EL3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MRPL53Q96EL3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MRPL53Q96EL3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms