Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC007029.1-201ENST00000604183 313 ntBASIC21.74■■□□□ 1.07
APH1AQ96BI3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APH1AQ96BI3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
APH1AQ96BI3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
APH1AQ96BI3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
APH1AQ96BI3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APH1AQ96BI3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APH1AQ96BI3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
APH1AQ96BI3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APH1AQ96BI3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APH1AQ96BI3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
APH1AQ96BI3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.72■■□□□ 1.07
APH1AQ96BI3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.72■■□□□ 1.07
APH1AQ96BI3 MIR3960-201ENST00000583311 91 ntBASIC21.72■■□□□ 1.07
APH1AQ96BI3 AC142472.1-201ENST00000612013 1741 ntBASIC21.72■■□□□ 1.07
APH1AQ96BI3 AP004609.3-201ENST00000610705 1884 ntBASIC21.71■■□□□ 1.07
APH1AQ96BI3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APH1AQ96BI3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APH1AQ96BI3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
APH1AQ96BI3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APH1AQ96BI3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.7■■□□□ 1.06
APH1AQ96BI3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APH1AQ96BI3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
APH1AQ96BI3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
APH1AQ96BI3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.69■■□□□ 1.06
APH1AQ96BI3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
APH1AQ96BI3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.69■■□□□ 1.06
APH1AQ96BI3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.69■■□□□ 1.06
APH1AQ96BI3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APH1AQ96BI3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
APH1AQ96BI3 RP9P-202ENST00000450133 1212 ntBASIC21.68■■□□□ 1.06
APH1AQ96BI3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.68■■□□□ 1.06
APH1AQ96BI3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
APH1AQ96BI3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APH1AQ96BI3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APH1AQ96BI3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APH1AQ96BI3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
APH1AQ96BI3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
APH1AQ96BI3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
APH1AQ96BI3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
APH1AQ96BI3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.67■■□□□ 1.06
APH1AQ96BI3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
APH1AQ96BI3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.67■■□□□ 1.06
APH1AQ96BI3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APH1AQ96BI3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APH1AQ96BI3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APH1AQ96BI3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
APH1AQ96BI3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APH1AQ96BI3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
APH1AQ96BI3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
APH1AQ96BI3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.65■■□□□ 1.06
APH1AQ96BI3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.65■■□□□ 1.06
APH1AQ96BI3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
APH1AQ96BI3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.65■■□□□ 1.06
APH1AQ96BI3 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.65■■□□□ 1.06
APH1AQ96BI3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
APH1AQ96BI3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
APH1AQ96BI3 AC093536.1-201ENST00000569153 554 ntBASIC21.64■■□□□ 1.05
APH1AQ96BI3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
APH1AQ96BI3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
APH1AQ96BI3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
APH1AQ96BI3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
APH1AQ96BI3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.63■■□□□ 1.05
APH1AQ96BI3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.63■■□□□ 1.05
APH1AQ96BI3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APH1AQ96BI3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
APH1AQ96BI3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.62■■□□□ 1.05
APH1AQ96BI3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
APH1AQ96BI3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
APH1AQ96BI3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APH1AQ96BI3 NTF6A-201ENST00000591175 560 ntBASIC21.61■■□□□ 1.05
APH1AQ96BI3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
APH1AQ96BI3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.61■■□□□ 1.05
APH1AQ96BI3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APH1AQ96BI3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.6■■□□□ 1.05
APH1AQ96BI3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
APH1AQ96BI3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APH1AQ96BI3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APH1AQ96BI3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.6■■□□□ 1.05
APH1AQ96BI3 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.6■■□□□ 1.05
APH1AQ96BI3 AC133552.2-201ENST00000619106 1032 ntBASIC21.6■■□□□ 1.05
APH1AQ96BI3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
APH1AQ96BI3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
APH1AQ96BI3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
APH1AQ96BI3 AC026202.3-201ENST00000600805 1127 ntBASIC21.59■■□□□ 1.05
APH1AQ96BI3 U85056.1-201ENST00000616429 682 ntBASIC21.59■■□□□ 1.05
APH1AQ96BI3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.59■■□□□ 1.05
APH1AQ96BI3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms