Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ZNF428Q96B54 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.76■■■□□ 2.67
ZNF428Q96B54 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.76■■■□□ 2.67
ZNF428Q96B54 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.75■■■□□ 2.67
ZNF428Q96B54 AC092296.2-201ENST00000589470 999 ntBASIC31.75■■■□□ 2.67
ZNF428Q96B54 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ZNF428Q96B54 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ZNF428Q96B54 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
ZNF428Q96B54 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ZNF428Q96B54 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
ZNF428Q96B54 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ZNF428Q96B54 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ZNF428Q96B54 AP004609.3-201ENST00000610705 1884 ntBASIC31.72■■■□□ 2.67
ZNF428Q96B54 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ZNF428Q96B54 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.72■■■□□ 2.67
ZNF428Q96B54 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.72■■■□□ 2.67
ZNF428Q96B54 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ZNF428Q96B54 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.71■■■□□ 2.67
ZNF428Q96B54 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.71■■■□□ 2.67
ZNF428Q96B54 AL157400.5-201ENST00000507624 621 ntBASIC31.71■■■□□ 2.67
ZNF428Q96B54 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.71■■■□□ 2.67
ZNF428Q96B54 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.7■■■□□ 2.67
ZNF428Q96B54 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.7■■■□□ 2.67
ZNF428Q96B54 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ZNF428Q96B54 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ZNF428Q96B54 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
ZNF428Q96B54 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
ZNF428Q96B54 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.69■■■□□ 2.66
ZNF428Q96B54 AL033527.3-201ENST00000566366 1196 ntBASIC31.69■■■□□ 2.66
ZNF428Q96B54 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
ZNF428Q96B54 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.68■■■□□ 2.66
ZNF428Q96B54 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ZNF428Q96B54 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ZNF428Q96B54 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ZNF428Q96B54 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ZNF428Q96B54 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ZNF428Q96B54 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.67■■■□□ 2.66
ZNF428Q96B54 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
ZNF428Q96B54 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF428Q96B54 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF428Q96B54 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZNF428Q96B54 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZNF428Q96B54 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ZNF428Q96B54 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ZNF428Q96B54 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
ZNF428Q96B54 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZNF428Q96B54 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZNF428Q96B54 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ZNF428Q96B54 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZNF428Q96B54 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.62■■■□□ 2.65
ZNF428Q96B54 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZNF428Q96B54 AC012354.3-201ENST00000623734 483 ntBASIC31.62■■■□□ 2.65
ZNF428Q96B54 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF428Q96B54 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF428Q96B54 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
ZNF428Q96B54 AL359504.2-201ENST00000605506 1601 ntBASIC31.61■■■□□ 2.65
ZNF428Q96B54 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF428Q96B54 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF428Q96B54 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZNF428Q96B54 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZNF428Q96B54 KRT18P60-201ENST00000312876 1297 ntBASIC31.6■■■□□ 2.65
ZNF428Q96B54 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
ZNF428Q96B54 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ZNF428Q96B54 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ZNF428Q96B54 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZNF428Q96B54 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.58■■■□□ 2.65
ZNF428Q96B54 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZNF428Q96B54 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
ZNF428Q96B54 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.58■■■□□ 2.65
ZNF428Q96B54 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZNF428Q96B54 ECEL1P2-201ENST00000461596 1295 ntBASIC31.58■■■□□ 2.65
ZNF428Q96B54 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.65
ZNF428Q96B54 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF428Q96B54 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.57■■■□□ 2.64
ZNF428Q96B54 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF428Q96B54 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZNF428Q96B54 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZNF428Q96B54 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.56■■■□□ 2.64
ZNF428Q96B54 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZNF428Q96B54 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZNF428Q96B54 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZNF428Q96B54 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.55■■■□□ 2.64
ZNF428Q96B54 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.55■■■□□ 2.64
ZNF428Q96B54 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZNF428Q96B54 AC025884.2-201ENST00000553429 711 ntBASIC31.54■■■□□ 2.64
ZNF428Q96B54 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZNF428Q96B54 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZNF428Q96B54 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZNF428Q96B54 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.53■■■□□ 2.64
ZNF428Q96B54 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.52■■■□□ 2.64
ZNF428Q96B54 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.52■■■□□ 2.64
ZNF428Q96B54 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZNF428Q96B54 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.52■■■□□ 2.64
ZNF428Q96B54 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms