Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RTF1Q92541 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RTF1Q92541 RAP2CP1-202ENST00000605179 643 ntBASIC32.26■■■□□ 2.75
RTF1Q92541 AC129492.7-201ENST00000622992 756 ntBASIC32.26■■■□□ 2.75
RTF1Q92541 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.26■■■□□ 2.75
RTF1Q92541 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RTF1Q92541 AL449106.1-201ENST00000608517 1980 ntBASIC32.25■■■□□ 2.75
RTF1Q92541 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.25■■■□□ 2.75
RTF1Q92541 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
RTF1Q92541 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
RTF1Q92541 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
RTF1Q92541 BX255925.1-201ENST00000566954 1854 ntBASIC32.25■■■□□ 2.75
RTF1Q92541 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.24■■■□□ 2.75
RTF1Q92541 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.24■■■□□ 2.75
RTF1Q92541 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
RTF1Q92541 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
RTF1Q92541 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
RTF1Q92541 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
RTF1Q92541 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.23■■■□□ 2.75
RTF1Q92541 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
RTF1Q92541 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RTF1Q92541 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RTF1Q92541 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.22■■■□□ 2.75
RTF1Q92541 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTF1Q92541 AC142086.6-201ENST00000621154 1765 ntBASIC32.22■■■□□ 2.75
RTF1Q92541 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
RTF1Q92541 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
RTF1Q92541 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RTF1Q92541 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
RTF1Q92541 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.21■■■□□ 2.75
RTF1Q92541 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
RTF1Q92541 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
RTF1Q92541 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
RTF1Q92541 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.2■■■□□ 2.75
RTF1Q92541 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
RTF1Q92541 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RTF1Q92541 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RTF1Q92541 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RTF1Q92541 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
RTF1Q92541 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RTF1Q92541 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.18■■■□□ 2.74
RTF1Q92541 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RTF1Q92541 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.18■■■□□ 2.74
RTF1Q92541 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.18■■■□□ 2.74
RTF1Q92541 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RTF1Q92541 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.17■■■□□ 2.74
RTF1Q92541 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RTF1Q92541 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32.16■■■□□ 2.74
RTF1Q92541 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
RTF1Q92541 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.16■■■□□ 2.74
RTF1Q92541 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
RTF1Q92541 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RTF1Q92541 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RTF1Q92541 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.15■■■□□ 2.74
RTF1Q92541 DUX4L18-201ENST00000553347 1267 ntBASIC32.15■■■□□ 2.74
RTF1Q92541 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RTF1Q92541 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RTF1Q92541 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RTF1Q92541 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RTF1Q92541 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.13■■■□□ 2.73
RTF1Q92541 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.13■■■□□ 2.73
RTF1Q92541 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
RTF1Q92541 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RTF1Q92541 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.12■■■□□ 2.73
RTF1Q92541 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RTF1Q92541 DUX4L9-201ENST00000449051 1259 ntBASIC32.11■■■□□ 2.73
RTF1Q92541 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.11■■■□□ 2.73
RTF1Q92541 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RTF1Q92541 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
RTF1Q92541 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RTF1Q92541 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RTF1Q92541 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTF1Q92541 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTF1Q92541 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTF1Q92541 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTF1Q92541 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTF1Q92541 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC32.08■■■□□ 2.73
RTF1Q92541 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.08■■■□□ 2.73
RTF1Q92541 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
RTF1Q92541 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RTF1Q92541 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RTF1Q92541 SPCS2P3-201ENST00000500401 656 ntBASIC32.07■■■□□ 2.72
RTF1Q92541 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
RTF1Q92541 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTF1Q92541 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTF1Q92541 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTF1Q92541 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.06■■■□□ 2.72
RTF1Q92541 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RTF1Q92541 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
RTF1Q92541 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
RTF1Q92541 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.05■■■□□ 2.72
RTF1Q92541 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
RTF1Q92541 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
RTF1Q92541 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
RTF1Q92541 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
RTF1Q92541 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.03■■■□□ 2.72
RTF1Q92541 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.03■■■□□ 2.72
RTF1Q92541 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.03■■■□□ 2.72
RTF1Q92541 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RTF1Q92541 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms