Protein–RNA interactions for Protein: Q91Y13

Pcdha7, Protocadherin alpha-7, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha7Q91Y13 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha7Q91Y13 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdha7Q91Y13 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdha7Q91Y13 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdha7Q91Y13 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdha7Q91Y13 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha7Q91Y13 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdha7Q91Y13 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Pcdha7Q91Y13 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha7Q91Y13 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdha7Q91Y13 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdha7Q91Y13 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha7Q91Y13 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdha7Q91Y13 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Pcdha7Q91Y13 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha7Q91Y13 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdha7Q91Y13 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdha7Q91Y13 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Pcdha7Q91Y13 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha7Q91Y13 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Gm8503-201ENSMUST00000118131 455 ntBASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.36■■□□□ 1.49
Pcdha7Q91Y13 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdha7Q91Y13 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdha7Q91Y13 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdha7Q91Y13 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Pcdha7Q91Y13 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdha7Q91Y13 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdha7Q91Y13 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdha7Q91Y13 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.33■■□□□ 1.49
Pcdha7Q91Y13 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdha7Q91Y13 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdha7Q91Y13 Gm4799-201ENSMUST00000095396 657 ntBASIC24.32■■□□□ 1.48
Pcdha7Q91Y13 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdha7Q91Y13 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Pcdha7Q91Y13 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.31■■□□□ 1.48
Pcdha7Q91Y13 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdha7Q91Y13 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.29■■□□□ 1.48
Pcdha7Q91Y13 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdha7Q91Y13 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdha7Q91Y13 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdha7Q91Y13 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdha7Q91Y13 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdha7Q91Y13 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdha7Q91Y13 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdha7Q91Y13 Gm9812-201ENSMUST00000061934 968 ntBASIC24.25■■□□□ 1.47
Pcdha7Q91Y13 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Pcdha7Q91Y13 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Pcdha7Q91Y13 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.25■■□□□ 1.47
Pcdha7Q91Y13 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdha7Q91Y13 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.24■■□□□ 1.47
Pcdha7Q91Y13 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms