Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx41Q91VN6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx41Q91VN6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx41Q91VN6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ddx41Q91VN6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.52■■□□□ 1.68
Ddx41Q91VN6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Ddx41Q91VN6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx41Q91VN6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx41Q91VN6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx41Q91VN6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx41Q91VN6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.5■■□□□ 1.67
Ddx41Q91VN6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Ddx41Q91VN6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.5■■□□□ 1.67
Ddx41Q91VN6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx41Q91VN6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.49■■□□□ 1.67
Ddx41Q91VN6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx41Q91VN6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx41Q91VN6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.48■■□□□ 1.67
Ddx41Q91VN6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.48■■□□□ 1.67
Ddx41Q91VN6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx41Q91VN6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx41Q91VN6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx41Q91VN6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx41Q91VN6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx41Q91VN6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx41Q91VN6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx41Q91VN6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx41Q91VN6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx41Q91VN6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Ddx41Q91VN6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx41Q91VN6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.44■■□□□ 1.66
Ddx41Q91VN6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx41Q91VN6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx41Q91VN6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx41Q91VN6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx41Q91VN6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx41Q91VN6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx41Q91VN6 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.43■■□□□ 1.66
Ddx41Q91VN6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx41Q91VN6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx41Q91VN6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx41Q91VN6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx41Q91VN6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx41Q91VN6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ddx41Q91VN6 Gm10420-201ENSMUST00000121713 882 ntBASIC25.4■■□□□ 1.66
Ddx41Q91VN6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ddx41Q91VN6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx41Q91VN6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx41Q91VN6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx41Q91VN6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx41Q91VN6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.39■■□□□ 1.66
Ddx41Q91VN6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx41Q91VN6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx41Q91VN6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx41Q91VN6 Gm44428-201ENSMUST00000204474 874 ntBASIC25.38■■□□□ 1.65
Ddx41Q91VN6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx41Q91VN6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ddx41Q91VN6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.37■■□□□ 1.65
Ddx41Q91VN6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx41Q91VN6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx41Q91VN6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx41Q91VN6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx41Q91VN6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Ddx41Q91VN6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx41Q91VN6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.35■■□□□ 1.65
Ddx41Q91VN6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.35■■□□□ 1.65
Ddx41Q91VN6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx41Q91VN6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx41Q91VN6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.34■■□□□ 1.65
Ddx41Q91VN6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx41Q91VN6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Ddx41Q91VN6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Ddx41Q91VN6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Ddx41Q91VN6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx41Q91VN6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx41Q91VN6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx41Q91VN6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx41Q91VN6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.31■■□□□ 1.64
Ddx41Q91VN6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx41Q91VN6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx41Q91VN6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx41Q91VN6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ddx41Q91VN6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Ddx41Q91VN6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx41Q91VN6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.29■■□□□ 1.64
Ddx41Q91VN6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx41Q91VN6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx41Q91VN6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms