Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCD2Q8WV60 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD2Q8WV60 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCD2Q8WV60 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCD2Q8WV60 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.83■■□□□ 1.57
PTCD2Q8WV60 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
PTCD2Q8WV60 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PTCD2Q8WV60 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCD2Q8WV60 AC022413.1-201ENST00000624602 984 ntBASIC24.82■■□□□ 1.56
PTCD2Q8WV60 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AC091060.1-201ENST00000623524 1766 ntBASIC24.81■■□□□ 1.56
PTCD2Q8WV60 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.81■■□□□ 1.56
PTCD2Q8WV60 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD2Q8WV60 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD2Q8WV60 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD2Q8WV60 AC060814.1-201ENST00000554326 538 ntBASIC24.78■■□□□ 1.56
PTCD2Q8WV60 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCD2Q8WV60 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD2Q8WV60 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 RARRES2P2-201ENST00000394842 485 ntBASIC24.76■■□□□ 1.55
PTCD2Q8WV60 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.76■■□□□ 1.55
PTCD2Q8WV60 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 AC145676.1-201ENST00000514988 2004 ntBASIC24.75■■□□□ 1.55
PTCD2Q8WV60 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCD2Q8WV60 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.74■■□□□ 1.55
PTCD2Q8WV60 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 RNF126P1-201ENST00000567452 1320 ntBASIC24.73■■□□□ 1.55
PTCD2Q8WV60 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.73■■□□□ 1.55
PTCD2Q8WV60 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.72■■□□□ 1.55
PTCD2Q8WV60 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PTCD2Q8WV60 AC092803.2-201ENST00000564287 1899 ntBASIC24.7■■□□□ 1.55
PTCD2Q8WV60 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.55
PTCD2Q8WV60 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PTCD2Q8WV60 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms