Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab40bQ8VHP8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab40bQ8VHP8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab40bQ8VHP8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
Rab40bQ8VHP8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.07■□□□□ 0.8
Rab40bQ8VHP8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab40bQ8VHP8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rab40bQ8VHP8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab40bQ8VHP8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab40bQ8VHP8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab40bQ8VHP8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rab40bQ8VHP8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40bQ8VHP8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40bQ8VHP8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40bQ8VHP8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40bQ8VHP8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rab40bQ8VHP8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.02■□□□□ 0.8
Rab40bQ8VHP8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab40bQ8VHP8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.02■□□□□ 0.8
Rab40bQ8VHP8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab40bQ8VHP8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.02■□□□□ 0.8
Rab40bQ8VHP8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab40bQ8VHP8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab40bQ8VHP8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab40bQ8VHP8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab40bQ8VHP8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab40bQ8VHP8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab40bQ8VHP8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rab40bQ8VHP8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rab40bQ8VHP8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rab40bQ8VHP8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Rab40bQ8VHP8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab40bQ8VHP8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rab40bQ8VHP8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab40bQ8VHP8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40bQ8VHP8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40bQ8VHP8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40bQ8VHP8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab40bQ8VHP8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rab40bQ8VHP8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Nkain2-201ENSMUST00000092602 558 ntBASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab40bQ8VHP8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40bQ8VHP8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab40bQ8VHP8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rab40bQ8VHP8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rab40bQ8VHP8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab40bQ8VHP8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rab40bQ8VHP8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab40bQ8VHP8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40bQ8VHP8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40bQ8VHP8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab40bQ8VHP8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40bQ8VHP8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rab40bQ8VHP8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab40bQ8VHP8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.91■□□□□ 0.78
Rab40bQ8VHP8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab40bQ8VHP8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rab40bQ8VHP8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab40bQ8VHP8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab40bQ8VHP8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab40bQ8VHP8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms