Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00308Q8TCZ7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00308Q8TCZ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00308Q8TCZ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00308Q8TCZ7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00308Q8TCZ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00308Q8TCZ7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00308Q8TCZ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 AC138932.3-201ENST00000567634 1902 ntBASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 AC142472.1-201ENST00000612013 1741 ntBASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00308Q8TCZ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00308Q8TCZ7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00308Q8TCZ7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00308Q8TCZ7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00308Q8TCZ7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00308Q8TCZ7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 AC022211.4-201ENST00000625094 2161 ntBASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 AC010501.1-201ENST00000606270 1962 ntBASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LINC00308Q8TCZ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00308Q8TCZ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00308Q8TCZ7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00308Q8TCZ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00308Q8TCZ7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00308Q8TCZ7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00308Q8TCZ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00308Q8TCZ7 AP002365.1-201ENST00000603448 772 ntBASIC16.2■□□□□ 0.18
LINC00308Q8TCZ7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00308Q8TCZ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00308Q8TCZ7 AC135983.2-203ENST00000454486 1613 ntBASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00308Q8TCZ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC00308Q8TCZ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms