Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NGEFQ8N5V2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.5■■■□□ 2.79
NGEFQ8N5V2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.5■■■□□ 2.79
NGEFQ8N5V2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NGEFQ8N5V2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC32.49■■■□□ 2.79
NGEFQ8N5V2 AC126177.7-201ENST00000547904 679 ntBASIC32.48■■■□□ 2.79
NGEFQ8N5V2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
NGEFQ8N5V2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC32.46■■■□□ 2.79
NGEFQ8N5V2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
NGEFQ8N5V2 AL359258.2-201ENST00000564063 1566 ntBASIC32.46■■■□□ 2.79
NGEFQ8N5V2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NGEFQ8N5V2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NGEFQ8N5V2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.45■■■□□ 2.79
NGEFQ8N5V2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.45■■■□□ 2.79
NGEFQ8N5V2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NGEFQ8N5V2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.43■■■□□ 2.78
NGEFQ8N5V2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
NGEFQ8N5V2 AC060814.1-201ENST00000554326 538 ntBASIC32.43■■■□□ 2.78
NGEFQ8N5V2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NGEFQ8N5V2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.43■■■□□ 2.78
NGEFQ8N5V2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC32.43■■■□□ 2.78
NGEFQ8N5V2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NGEFQ8N5V2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
NGEFQ8N5V2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
NGEFQ8N5V2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.42■■■□□ 2.78
NGEFQ8N5V2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.41■■■□□ 2.78
NGEFQ8N5V2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
NGEFQ8N5V2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
NGEFQ8N5V2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC32.41■■■□□ 2.78
NGEFQ8N5V2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NGEFQ8N5V2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NGEFQ8N5V2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NGEFQ8N5V2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NGEFQ8N5V2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NGEFQ8N5V2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.39■■■□□ 2.78
NGEFQ8N5V2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NGEFQ8N5V2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.39■■■□□ 2.78
NGEFQ8N5V2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NGEFQ8N5V2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.38■■■□□ 2.77
NGEFQ8N5V2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
NGEFQ8N5V2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
NGEFQ8N5V2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NGEFQ8N5V2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.37■■■□□ 2.77
NGEFQ8N5V2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.37■■■□□ 2.77
NGEFQ8N5V2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
NGEFQ8N5V2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
NGEFQ8N5V2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
NGEFQ8N5V2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.35■■■□□ 2.77
NGEFQ8N5V2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NGEFQ8N5V2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NGEFQ8N5V2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NGEFQ8N5V2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NGEFQ8N5V2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NGEFQ8N5V2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.34■■■□□ 2.77
NGEFQ8N5V2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
NGEFQ8N5V2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
NGEFQ8N5V2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.33■■■□□ 2.77
NGEFQ8N5V2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.33■■■□□ 2.77
NGEFQ8N5V2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.33■■■□□ 2.77
NGEFQ8N5V2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.32■■■□□ 2.77
NGEFQ8N5V2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC32.32■■■□□ 2.76
NGEFQ8N5V2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
NGEFQ8N5V2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
NGEFQ8N5V2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
NGEFQ8N5V2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NGEFQ8N5V2 NTF6A-201ENST00000591175 560 ntBASIC32.31■■■□□ 2.76
NGEFQ8N5V2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NGEFQ8N5V2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NGEFQ8N5V2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.3■■■□□ 2.76
NGEFQ8N5V2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NGEFQ8N5V2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.28■■■□□ 2.76
NGEFQ8N5V2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.28■■■□□ 2.76
NGEFQ8N5V2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
NGEFQ8N5V2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 AL359504.2-201ENST00000605506 1601 ntBASIC32.27■■■□□ 2.76
NGEFQ8N5V2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
NGEFQ8N5V2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
NGEFQ8N5V2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
NGEFQ8N5V2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NGEFQ8N5V2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 U85056.1-201ENST00000616429 682 ntBASIC32.24■■■□□ 2.75
NGEFQ8N5V2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NGEFQ8N5V2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
NGEFQ8N5V2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.23■■■□□ 2.75
NGEFQ8N5V2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
NGEFQ8N5V2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms