Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AL157400.5-201ENST00000507624 621 ntBASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAB42Q8N4Z0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAB42Q8N4Z0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 AL359504.2-201ENST00000605506 1601 ntBASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB42Q8N4Z0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 SMPD5-203ENST00000639008 1464 ntBASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB42Q8N4Z0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB42Q8N4Z0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB42Q8N4Z0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.81■■□□□ 1.4
RAB42Q8N4Z0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB42Q8N4Z0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB42Q8N4Z0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB42Q8N4Z0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB42Q8N4Z0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB42Q8N4Z0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB42Q8N4Z0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 MIR3960-201ENST00000583311 91 ntBASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 AL121749.1-202ENST00000609313 2153 ntBASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB42Q8N4Z0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB42Q8N4Z0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.78■■□□□ 1.4
RAB42Q8N4Z0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAB42Q8N4Z0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAB42Q8N4Z0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 AC025884.2-201ENST00000553429 711 ntBASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RAB42Q8N4Z0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 RARRES2P2-201ENST00000394842 485 ntBASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB42Q8N4Z0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB42Q8N4Z0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAB42Q8N4Z0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.74■■□□□ 1.39
RAB42Q8N4Z0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.74■■□□□ 1.39
RAB42Q8N4Z0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
RAB42Q8N4Z0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.74■■□□□ 1.39
RAB42Q8N4Z0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAB42Q8N4Z0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 AC007029.1-201ENST00000604183 313 ntBASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAB42Q8N4Z0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RAB42Q8N4Z0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.71■■□□□ 1.39
RAB42Q8N4Z0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAB42Q8N4Z0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.71■■□□□ 1.39
RAB42Q8N4Z0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RAB42Q8N4Z0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
RAB42Q8N4Z0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RAB42Q8N4Z0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RAB42Q8N4Z0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 RP9P-202ENST00000450133 1212 ntBASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAB42Q8N4Z0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms