Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
ABCA6Q8N139 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
ABCA6Q8N139 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC37.32■■■■□ 3.57
ABCA6Q8N139 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC37.32■■■■□ 3.57
ABCA6Q8N139 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
ABCA6Q8N139 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC37.32■■■■□ 3.56
ABCA6Q8N139 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC37.31■■■■□ 3.56
ABCA6Q8N139 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
ABCA6Q8N139 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
ABCA6Q8N139 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
ABCA6Q8N139 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
ABCA6Q8N139 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
ABCA6Q8N139 AC018755.3-202ENST00000596210 929 ntBASIC37.29■■■■□ 3.56
ABCA6Q8N139 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
ABCA6Q8N139 RNF146-205ENST00000477776 762 ntTSL 3 BASIC37.28■■■■□ 3.56
ABCA6Q8N139 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC37.28■■■■□ 3.56
ABCA6Q8N139 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC37.28■■■■□ 3.56
ABCA6Q8N139 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC37.28■■■■□ 3.56
ABCA6Q8N139 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC37.27■■■■□ 3.56
ABCA6Q8N139 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
ABCA6Q8N139 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
ABCA6Q8N139 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.56
ABCA6Q8N139 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
ABCA6Q8N139 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC37.26■■■■□ 3.56
ABCA6Q8N139 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.56
ABCA6Q8N139 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
ABCA6Q8N139 MTX2-204ENST00000443241 799 ntTSL 3 BASIC37.25■■■■□ 3.55
ABCA6Q8N139 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
ABCA6Q8N139 MIR935-201ENST00000401179 91 ntBASIC37.25■■■■□ 3.55
ABCA6Q8N139 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
ABCA6Q8N139 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC37.24■■■■□ 3.55
ABCA6Q8N139 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
ABCA6Q8N139 CREM-229ENST00000474362 1030 ntTSL 2 BASIC37.22■■■■□ 3.55
ABCA6Q8N139 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ABCA6Q8N139 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ABCA6Q8N139 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ABCA6Q8N139 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
ABCA6Q8N139 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC37.2■■■■□ 3.55
ABCA6Q8N139 AC019171.1-201ENST00000601251 1056 ntBASIC37.2■■■■□ 3.55
ABCA6Q8N139 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC37.2■■■■□ 3.55
ABCA6Q8N139 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC37.19■■■■□ 3.54
ABCA6Q8N139 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
ABCA6Q8N139 Z92544.1-202ENST00000571933 1220 ntBASIC37.19■■■■□ 3.54
ABCA6Q8N139 AL359504.2-201ENST00000605506 1601 ntBASIC37.19■■■■□ 3.54
ABCA6Q8N139 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC37.19■■■■□ 3.54
ABCA6Q8N139 TK2-216ENST00000564917 1156 ntTSL 3 BASIC37.18■■■■□ 3.54
ABCA6Q8N139 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.18■■■■□ 3.54
ABCA6Q8N139 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ABCA6Q8N139 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC37.17■■■■□ 3.54
ABCA6Q8N139 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ABCA6Q8N139 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC37.17■■■■□ 3.54
ABCA6Q8N139 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC37.16■■■■□ 3.54
ABCA6Q8N139 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC37.16■■■■□ 3.54
ABCA6Q8N139 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC37.16■■■■□ 3.54
ABCA6Q8N139 AC239859.2-201ENST00000444165 318 ntBASIC37.16■■■■□ 3.54
ABCA6Q8N139 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC37.14■■■■□ 3.54
ABCA6Q8N139 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
ABCA6Q8N139 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
ABCA6Q8N139 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC37.14■■■■□ 3.54
ABCA6Q8N139 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC37.13■■■■□ 3.53
ABCA6Q8N139 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC37.13■■■■□ 3.53
ABCA6Q8N139 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.13■■■■□ 3.53
ABCA6Q8N139 AP002414.2-202ENST00000590929 1450 ntBASIC37.13■■■■□ 3.53
ABCA6Q8N139 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC37.12■■■■□ 3.53
ABCA6Q8N139 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
ABCA6Q8N139 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
ABCA6Q8N139 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC37.11■■■■□ 3.53
ABCA6Q8N139 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC37.11■■■■□ 3.53
ABCA6Q8N139 AC087393.1-201ENST00000582896 145 ntBASIC37.11■■■■□ 3.53
ABCA6Q8N139 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
ABCA6Q8N139 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC37.11■■■■□ 3.53
ABCA6Q8N139 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
ABCA6Q8N139 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC37.1■■■■□ 3.53
ABCA6Q8N139 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
ABCA6Q8N139 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
ABCA6Q8N139 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
ABCA6Q8N139 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC37.09■■■■□ 3.53
ABCA6Q8N139 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC37.09■■■■□ 3.53
ABCA6Q8N139 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC37.08■■■■□ 3.53
ABCA6Q8N139 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
ABCA6Q8N139 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC37.07■■■■□ 3.53
ABCA6Q8N139 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
ABCA6Q8N139 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC37.07■■■■□ 3.52
ABCA6Q8N139 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
ABCA6Q8N139 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC37.06■■■■□ 3.52
ABCA6Q8N139 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
ABCA6Q8N139 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
ABCA6Q8N139 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC37.03■■■■□ 3.52
ABCA6Q8N139 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC37.03■■■■□ 3.52
ABCA6Q8N139 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
ABCA6Q8N139 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.02■■■■□ 3.52
ABCA6Q8N139 AC008406.3-201ENST00000620001 1374 ntBASIC37.02■■■■□ 3.52
ABCA6Q8N139 UNC93B8-201ENST00000511903 705 ntBASIC37.01■■■■□ 3.52
ABCA6Q8N139 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC37.01■■■■□ 3.52
ABCA6Q8N139 ABCB10P3-201ENST00000561950 2166 ntBASIC37■■■■□ 3.51
ABCA6Q8N139 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC37■■■■□ 3.51
ABCA6Q8N139 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
ABCA6Q8N139 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
ABCA6Q8N139 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
ABCA6Q8N139 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms