Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx54Q8K4L0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ddx54Q8K4L0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC30.12■■■□□ 2.41
Ddx54Q8K4L0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ddx54Q8K4L0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.1■■■□□ 2.41
Ddx54Q8K4L0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC30.09■■■□□ 2.41
Ddx54Q8K4L0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.09■■■□□ 2.41
Ddx54Q8K4L0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Ddx54Q8K4L0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ddx54Q8K4L0 Gm5131-201ENSMUST00000212776 1238 ntBASIC30.08■■■□□ 2.41
Ddx54Q8K4L0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ddx54Q8K4L0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC30.06■■■□□ 2.4
Ddx54Q8K4L0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ddx54Q8K4L0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Ddx54Q8K4L0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ddx54Q8K4L0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.05■■■□□ 2.4
Ddx54Q8K4L0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ddx54Q8K4L0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC30.04■■■□□ 2.4
Ddx54Q8K4L0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ddx54Q8K4L0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ddx54Q8K4L0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC30.03■■■□□ 2.4
Ddx54Q8K4L0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ddx54Q8K4L0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC30.02■■■□□ 2.4
Ddx54Q8K4L0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Ddx54Q8K4L0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ddx54Q8K4L0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ddx54Q8K4L0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Gm7417-201ENSMUST00000192950 473 ntBASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ddx54Q8K4L0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30■■■□□ 2.39
Ddx54Q8K4L0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC30■■■□□ 2.39
Ddx54Q8K4L0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC30■■■□□ 2.39
Ddx54Q8K4L0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ddx54Q8K4L0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ddx54Q8K4L0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ddx54Q8K4L0 Gm21956-201ENSMUST00000179946 522 ntBASIC29.99■■■□□ 2.39
Ddx54Q8K4L0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ddx54Q8K4L0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC29.99■■■□□ 2.39
Ddx54Q8K4L0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ddx54Q8K4L0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ddx54Q8K4L0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ddx54Q8K4L0 Gm9847-201ENSMUST00000052528 599 ntBASIC29.98■■■□□ 2.39
Ddx54Q8K4L0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.98■■■□□ 2.39
Ddx54Q8K4L0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Ddx54Q8K4L0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ddx54Q8K4L0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ddx54Q8K4L0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ddx54Q8K4L0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Ddx54Q8K4L0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Ddx54Q8K4L0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC29.95■■■□□ 2.39
Ddx54Q8K4L0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
Ddx54Q8K4L0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC29.94■■■□□ 2.38
Ddx54Q8K4L0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Ddx54Q8K4L0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC29.94■■■□□ 2.38
Ddx54Q8K4L0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ddx54Q8K4L0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ddx54Q8K4L0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Ddx54Q8K4L0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ddx54Q8K4L0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ddx54Q8K4L0 Zxda-201ENSMUST00000117281 2621 ntBASIC29.91■■■□□ 2.38
Ddx54Q8K4L0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Ddx54Q8K4L0 Gm4419-202ENSMUST00000226239 1431 ntBASIC29.9■■■□□ 2.38
Ddx54Q8K4L0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
Ddx54Q8K4L0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Ddx54Q8K4L0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ddx54Q8K4L0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.88■■■□□ 2.37
Ddx54Q8K4L0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ddx54Q8K4L0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Ddx54Q8K4L0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ddx54Q8K4L0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC29.86■■■□□ 2.37
Ddx54Q8K4L0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC29.86■■■□□ 2.37
Ddx54Q8K4L0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Ddx54Q8K4L0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ddx54Q8K4L0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx54Q8K4L0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx54Q8K4L0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx54Q8K4L0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx54Q8K4L0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx54Q8K4L0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Ddx54Q8K4L0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.83■■■□□ 2.37
Ddx54Q8K4L0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ddx54Q8K4L0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx54Q8K4L0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms