Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cnot3Q8K0V4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnot3Q8K0V4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cnot3Q8K0V4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cnot3Q8K0V4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cnot3Q8K0V4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cnot3Q8K0V4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cnot3Q8K0V4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Gm45855-201ENSMUST00000212546 880 ntBASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cnot3Q8K0V4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cnot3Q8K0V4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cnot3Q8K0V4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cnot3Q8K0V4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.89■□□□□ 0.93
Cnot3Q8K0V4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cnot3Q8K0V4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnot3Q8K0V4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Cnot3Q8K0V4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cnot3Q8K0V4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnot3Q8K0V4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cnot3Q8K0V4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.88■□□□□ 0.93
Cnot3Q8K0V4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cnot3Q8K0V4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnot3Q8K0V4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnot3Q8K0V4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cnot3Q8K0V4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cnot3Q8K0V4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cnot3Q8K0V4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cnot3Q8K0V4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.84■□□□□ 0.93
Cnot3Q8K0V4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnot3Q8K0V4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnot3Q8K0V4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cnot3Q8K0V4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnot3Q8K0V4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnot3Q8K0V4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cnot3Q8K0V4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.83■□□□□ 0.93
Cnot3Q8K0V4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cnot3Q8K0V4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cnot3Q8K0V4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.81■□□□□ 0.92
Cnot3Q8K0V4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Cnot3Q8K0V4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cnot3Q8K0V4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Cnot3Q8K0V4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cnot3Q8K0V4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cnot3Q8K0V4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cnot3Q8K0V4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cnot3Q8K0V4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cnot3Q8K0V4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnot3Q8K0V4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cnot3Q8K0V4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cnot3Q8K0V4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cnot3Q8K0V4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cnot3Q8K0V4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Gm37136-201ENSMUST00000194368 194 ntBASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
Cnot3Q8K0V4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cnot3Q8K0V4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cnot3Q8K0V4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnot3Q8K0V4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cnot3Q8K0V4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms