Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEFF1Q8IYR6 AP002414.2-202ENST00000590929 1450 ntBASIC24.65■■□□□ 1.54
TMEFF1Q8IYR6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEFF1Q8IYR6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.65■■□□□ 1.54
TMEFF1Q8IYR6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMEFF1Q8IYR6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TMEFF1Q8IYR6 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEFF1Q8IYR6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEFF1Q8IYR6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
TMEFF1Q8IYR6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.64■■□□□ 1.54
TMEFF1Q8IYR6 AC131212.1-201ENST00000613771 668 ntBASIC24.64■■□□□ 1.54
TMEFF1Q8IYR6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TMEFF1Q8IYR6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEFF1Q8IYR6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEFF1Q8IYR6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEFF1Q8IYR6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEFF1Q8IYR6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEFF1Q8IYR6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEFF1Q8IYR6 AL359504.2-201ENST00000605506 1601 ntBASIC24.61■■□□□ 1.53
TMEFF1Q8IYR6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEFF1Q8IYR6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
TMEFF1Q8IYR6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEFF1Q8IYR6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEFF1Q8IYR6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TMEFF1Q8IYR6 MIR4508-201ENST00000584178 70 ntBASIC24.6■■□□□ 1.53
TMEFF1Q8IYR6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TMEFF1Q8IYR6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEFF1Q8IYR6 AC139426.1-201ENST00000568218 2529 ntBASIC24.59■■□□□ 1.53
TMEFF1Q8IYR6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEFF1Q8IYR6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEFF1Q8IYR6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEFF1Q8IYR6 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.58■■□□□ 1.53
TMEFF1Q8IYR6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEFF1Q8IYR6 THA1P-201ENST00000590384 1145 ntBASIC24.58■■□□□ 1.53
TMEFF1Q8IYR6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEFF1Q8IYR6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
TMEFF1Q8IYR6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TMEFF1Q8IYR6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 GUSBP5-201ENST00000418136 578 ntBASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
TMEFF1Q8IYR6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEFF1Q8IYR6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEFF1Q8IYR6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TMEFF1Q8IYR6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.56■■□□□ 1.52
TMEFF1Q8IYR6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 AC103724.3-201ENST00000564481 992 ntBASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEFF1Q8IYR6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEFF1Q8IYR6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TMEFF1Q8IYR6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEFF1Q8IYR6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEFF1Q8IYR6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEFF1Q8IYR6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEFF1Q8IYR6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEFF1Q8IYR6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.53■■□□□ 1.52
TMEFF1Q8IYR6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.53■■□□□ 1.52
TMEFF1Q8IYR6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEFF1Q8IYR6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 AL031848.2-201ENST00000607670 837 ntBASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEFF1Q8IYR6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
TMEFF1Q8IYR6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.5■■□□□ 1.51
TMEFF1Q8IYR6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEFF1Q8IYR6 AC019069.1-201ENST00000610008 1333 ntBASIC24.5■■□□□ 1.51
TMEFF1Q8IYR6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEFF1Q8IYR6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEFF1Q8IYR6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms