Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sox30Q8CGW4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sox30Q8CGW4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.69■■□□□ 1.54
Sox30Q8CGW4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sox30Q8CGW4 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.69■■□□□ 1.54
Sox30Q8CGW4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Sox30Q8CGW4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sox30Q8CGW4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sox30Q8CGW4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sox30Q8CGW4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sox30Q8CGW4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.67■■□□□ 1.54
Sox30Q8CGW4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.67■■□□□ 1.54
Sox30Q8CGW4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Sox30Q8CGW4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sox30Q8CGW4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox30Q8CGW4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox30Q8CGW4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox30Q8CGW4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox30Q8CGW4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sox30Q8CGW4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sox30Q8CGW4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.64■■□□□ 1.53
Sox30Q8CGW4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sox30Q8CGW4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sox30Q8CGW4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sox30Q8CGW4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sox30Q8CGW4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sox30Q8CGW4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sox30Q8CGW4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sox30Q8CGW4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.62■■□□□ 1.53
Sox30Q8CGW4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Sox30Q8CGW4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sox30Q8CGW4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sox30Q8CGW4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox30Q8CGW4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sox30Q8CGW4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sox30Q8CGW4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox30Q8CGW4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sox30Q8CGW4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
Sox30Q8CGW4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sox30Q8CGW4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Sox30Q8CGW4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Sox30Q8CGW4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Sox30Q8CGW4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sox30Q8CGW4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sox30Q8CGW4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Sox30Q8CGW4 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.58■■□□□ 1.53
Sox30Q8CGW4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sox30Q8CGW4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.58■■□□□ 1.52
Sox30Q8CGW4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sox30Q8CGW4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sox30Q8CGW4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.57■■□□□ 1.52
Sox30Q8CGW4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sox30Q8CGW4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Sox30Q8CGW4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Sox30Q8CGW4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sox30Q8CGW4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Sox30Q8CGW4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sox30Q8CGW4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox30Q8CGW4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox30Q8CGW4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.53■■□□□ 1.52
Sox30Q8CGW4 Gm22567-201ENSMUST00000175542 342 ntBASIC24.53■■□□□ 1.52
Sox30Q8CGW4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sox30Q8CGW4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.53■■□□□ 1.52
Sox30Q8CGW4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.52■■□□□ 1.52
Sox30Q8CGW4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sox30Q8CGW4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sox30Q8CGW4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.51■■□□□ 1.51
Sox30Q8CGW4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sox30Q8CGW4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Gm9812-201ENSMUST00000061934 968 ntBASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.5■■□□□ 1.51
Sox30Q8CGW4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sox30Q8CGW4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sox30Q8CGW4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sox30Q8CGW4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.49■■□□□ 1.51
Sox30Q8CGW4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sox30Q8CGW4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sox30Q8CGW4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.48■■□□□ 1.51
Sox30Q8CGW4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms